Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm16089-201ENSMUST00000117679 336 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm11346-201ENSMUST00000118346 704 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm11262-201ENSMUST00000119326 833 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm25106-201ENSMUST00000122672 134 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm25824-201ENSMUST00000157092 121 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm24499-201ENSMUST00000158446 104 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Scarna6-201ENSMUST00000158656 265 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm22529-201ENSMUST00000158817 123 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rfx1P48377 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm27355-201ENSMUST00000185045 128 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm28097-201ENSMUST00000187333 366 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm34176-201ENSMUST00000192621 474 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Rfx1P48377 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm19326-201ENSMUST00000219818 326 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.66□□□□□ -1.5
Rfx1P48377 AC159203.2-201ENSMUST00000221326 193 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Gm7040-201ENSMUST00000223271 443 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm25929-201ENSMUST00000082784 107 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Rfx1P48377 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Rfx1P48377 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.66□□□□□ -1.5
Rfx1P48377 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rfx1P48377 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Rfx1P48377 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rfx1P48377 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Rfx1P48377 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Rfx1P48377 Gm13533-201ENSMUST00000121104 177 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Gm24402-201ENSMUST00000157873 91 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Rfx1P48377 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Rfx1P48377 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Rfx1P48377 Gm29668-201ENSMUST00000187802 315 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Gm6651-201ENSMUST00000189471 271 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Gm28467-201ENSMUST00000190981 318 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Gm44523-201ENSMUST00000205616 417 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Rfx1P48377 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Rfx1P48377 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.65□□□□□ -1.5
Rfx1P48377 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Rfx1P48377 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Rfx1P48377 Gm23679-201ENSMUST00000083161 119 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Gm23741-201ENSMUST00000097237 171 ntBASIC5.65□□□□□ -1.5
Rfx1P48377 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Rfx1P48377 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Rfx1P48377 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.65□□□□□ -1.51
Rfx1P48377 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Rfx1P48377 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Rfx1P48377 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Rfx1P48377 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm11550-201ENSMUST00000118210 699 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm15745-201ENSMUST00000119807 115 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm15142-201ENSMUST00000121013 856 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm12893-201ENSMUST00000121732 275 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm14578-201ENSMUST00000122166 391 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm24876-201ENSMUST00000158780 92 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm28623-201ENSMUST00000187219 192 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm28860-201ENSMUST00000188103 313 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm28061-201ENSMUST00000189085 807 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm43631-201ENSMUST00000202011 369 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Gm7692-201ENSMUST00000213534 409 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Rfx1P48377 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Rfx1P48377 AC167140.1-201ENSMUST00000224710 403 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Rfx1P48377 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Rfx1P48377 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Rfx1P48377 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms