Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.76□□□□□ -1.97
Cdx2P43241 Gm19080-201ENSMUST00000196082 550 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 Gm18660-201ENSMUST00000199542 629 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx2P43241 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.76□□□□□ -1.97
Cdx2P43241 Gm36247-201ENSMUST00000211834 285 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.76□□□□□ -1.97
Cdx2P43241 Gm19599-201ENSMUST00000218898 358 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx2P43241 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx2P43241 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.76□□□□□ -1.97
Cdx2P43241 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx2P43241 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx2P43241 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdx2P43241 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Cdx2P43241 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx2P43241 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Cdx2P43241 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.76□□□□□ -1.97
Cdx2P43241 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Cdx2P43241 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdx2P43241 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Cdx2P43241 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Cdx2P43241 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Cdx2P43241 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Cdx2P43241 Gm12782-201ENSMUST00000117519 727 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Gm12401-201ENSMUST00000118435 228 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.75□□□□□ -1.97
Cdx2P43241 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.75□□□□□ -1.97
Cdx2P43241 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.75□□□□□ -1.97
Cdx2P43241 Gm23325-201ENSMUST00000157422 129 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Gm25520-201ENSMUST00000158389 118 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Gm24816-201ENSMUST00000175311 151 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Cdx2P43241 Gm37353-201ENSMUST00000194497 313 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Gm44349-201ENSMUST00000197048 123 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Cdx2P43241 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC2.75□□□□□ -1.97
Cdx2P43241 Gm20074-201ENSMUST00000208144 484 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Cdx2P43241 Gm7422-201ENSMUST00000220115 640 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdx2P43241 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdx2P43241 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.75□□□□□ -1.97
Cdx2P43241 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Cdx2P43241 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
Cdx2P43241 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm5392-201ENSMUST00000122189 789 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx2P43241 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.74□□□□□ -1.97
Cdx2P43241 Gm23441-201ENSMUST00000157268 127 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm24922-201ENSMUST00000158511 102 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm3851-201ENSMUST00000168653 318 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm20526-201ENSMUST00000173416 158 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm26928-201ENSMUST00000182674 572 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx2P43241 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.74□□□□□ -1.97
Cdx2P43241 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm38075-201ENSMUST00000191979 920 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx2P43241 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm44425-201ENSMUST00000203739 429 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm18193-201ENSMUST00000210017 772 ntBASIC2.74□□□□□ -1.97
Cdx2P43241 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.74□□□□□ -1.97
Cdx2P43241 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.74□□□□□ -1.97
Cdx2P43241 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdx2P43241 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdx2P43241 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Cdx2P43241 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Cdx2P43241 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
Cdx2P43241 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Cdx2P43241 Gm12739-201ENSMUST00000119769 382 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm13511-201ENSMUST00000121167 363 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC2.73□□□□□ -1.97
Cdx2P43241 Gm24358-201ENSMUST00000158424 288 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.73□□□□□ -1.97
Cdx2P43241 Gm20660-201ENSMUST00000177515 289 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdx2P43241 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Cdx2P43241 Gm8392-201ENSMUST00000185647 835 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm6501-201ENSMUST00000187178 916 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm38076-201ENSMUST00000193889 450 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm43478-201ENSMUST00000200381 292 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.73□□□□□ -1.97
Cdx2P43241 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 Gm18899-201ENSMUST00000217663 546 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.73□□□□□ -1.97
Cdx2P43241 Gm2436-201ENSMUST00000219562 774 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.73□□□□□ -1.97
Cdx2P43241 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms