Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.16□□□□□ -1.9
Col2a1P28481 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm22116-201ENSMUST00000158791 141 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
Col2a1P28481 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col2a1P28481 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm28594-201ENSMUST00000187022 661 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm38283-201ENSMUST00000193041 695 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm43264-201ENSMUST00000202284 325 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm44954-201ENSMUST00000208513 227 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm45247-201ENSMUST00000210757 309 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.16□□□□□ -1.9
Col2a1P28481 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col2a1P28481 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Col2a1P28481 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm23377-201ENSMUST00000082943 126 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Col2a1P28481 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
Col2a1P28481 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col2a1P28481 Gm7421-201ENSMUST00000119298 639 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm14599-201ENSMUST00000120469 474 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm7365-201ENSMUST00000120877 639 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm12001-201ENSMUST00000121727 913 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.15□□□□□ -1.91
Col2a1P28481 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col2a1P28481 Gm26487-201ENSMUST00000158022 94 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm17164-201ENSMUST00000169013 506 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col2a1P28481 Gm27796-201ENSMUST00000183863 261 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm28596-201ENSMUST00000185870 696 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm29365-201ENSMUST00000189461 699 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm38075-201ENSMUST00000191979 920 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm32295-201ENSMUST00000192558 696 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm31260-201ENSMUST00000193478 696 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm37533-201ENSMUST00000193848 545 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Mir378a-201ENSMUST00000198300 66 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Gm42625-201ENSMUST00000198611 922 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col2a1P28481 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col2a1P28481 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col2a1P28481 Olfr192-201ENSMUST00000080251 925 ntBASIC3.15□□□□□ -1.91
Col2a1P28481 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col2a1P28481 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col2a1P28481 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col2a1P28481 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col2a1P28481 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Col2a1P28481 Gm13059-201ENSMUST00000119881 398 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm14957-201ENSMUST00000121069 817 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col2a1P28481 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col2a1P28481 Mir3075-201ENSMUST00000175340 85 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm20718-201ENSMUST00000176058 259 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm20660-201ENSMUST00000177515 289 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col2a1P28481 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col2a1P28481 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.14□□□□□ -1.91
Col2a1P28481 Gm38214-201ENSMUST00000192581 988 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm37993-201ENSMUST00000195301 988 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm43368-201ENSMUST00000200638 409 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Gm7422-201ENSMUST00000220115 640 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col2a1P28481 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col2a1P28481 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Col2a1P28481 Gm8074-201ENSMUST00000095071 252 ntBASIC3.14□□□□□ -1.91
Col2a1P28481 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col2a1P28481 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col2a1P28481 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col2a1P28481 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col2a1P28481 Mir682-201ENSMUST00000102281 96 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm14333-201ENSMUST00000130484 264 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm23960-201ENSMUST00000157206 131 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm25669-201ENSMUST00000157699 112 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm24854-201ENSMUST00000158025 98 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms