Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Cdx1P18111 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm12125-201ENSMUST00000117261 736 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm15783-201ENSMUST00000117521 633 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm12891-201ENSMUST00000119358 240 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm11645-201ENSMUST00000121589 649 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm14840-201ENSMUST00000122135 594 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm11575-201ENSMUST00000122243 228 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm25436-201ENSMUST00000158275 145 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm23198-201ENSMUST00000158811 91 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm17186-201ENSMUST00000171742 456 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm26556-201ENSMUST00000180645 320 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Mir6408-201ENSMUST00000183643 91 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm29598-201ENSMUST00000188996 588 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm37343-201ENSMUST00000192542 111 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm42465-201ENSMUST00000197036 492 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm45553-201ENSMUST00000209929 507 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC2.84□□□□□ -1.95
Cdx1P18111 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm8231-201ENSMUST00000221617 783 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm3565-201ENSMUST00000222670 609 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Gm25200-201ENSMUST00000083094 130 ntBASIC2.84□□□□□ -1.95
Cdx1P18111 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Cdx1P18111 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Cdx1P18111 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
Cdx1P18111 AC154634.4-201ENSMUST00000226077 2665 ntBASIC2.84□□□□□ -1.96
Cdx1P18111 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.84□□□□□ -1.96
Cdx1P18111 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Cdx1P18111 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Cdx1P18111 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Cdx1P18111 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Cdx1P18111 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Cdx1P18111 Gm11982-201ENSMUST00000121480 314 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Cdx1P18111 Gm11403-201ENSMUST00000122195 369 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm22957-201ENSMUST00000122511 123 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.83□□□□□ -1.96
Cdx1P18111 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Cdx1P18111 Gm26099-201ENSMUST00000157248 109 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm17194-201ENSMUST00000164610 348 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Cdx1P18111 Gm22776-201ENSMUST00000178634 94 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm23767-201ENSMUST00000179278 94 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC2.83□□□□□ -1.96
Cdx1P18111 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.83□□□□□ -1.96
Cdx1P18111 Mir7676-1-201ENSMUST00000183491 62 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Mir7676-2-201ENSMUST00000183523 62 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm7299-201ENSMUST00000194441 581 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Cdx1P18111 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm44099-201ENSMUST00000203299 112 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm44016-201ENSMUST00000203463 164 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm45105-201ENSMUST00000207824 397 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Gm45023-201ENSMUST00000207951 379 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Cdx1P18111 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.83□□□□□ -1.96
Cdx1P18111 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Cdx1P18111 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Cdx1P18111 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Cdx1P18111 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Cdx1P18111 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cdx1P18111 AC159193.2-201ENSMUST00000220865 4251 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm25105-201ENSMUST00000122477 130 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm22840-201ENSMUST00000158444 136 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Gm2862-201ENSMUST00000161524 328 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Gm20693-201ENSMUST00000177431 211 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm9632-201ENSMUST00000195934 643 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Gm20177-201ENSMUST00000203705 334 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Gm44332-201ENSMUST00000203712 433 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC2.82□□□□□ -1.96
Cdx1P18111 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm19540-201ENSMUST00000221843 810 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms