Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col1a1P11087 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Mir294-201ENSMUST00000104710 84 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm15074-201ENSMUST00000117603 936 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm7421-201ENSMUST00000119298 639 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm5384-201ENSMUST00000120313 463 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm7365-201ENSMUST00000120877 639 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm22257-201ENSMUST00000158687 301 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm17072-201ENSMUST00000166673 658 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm22264-201ENSMUST00000178200 107 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm28974-201ENSMUST00000187893 231 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm18843-201ENSMUST00000194982 719 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm6615-201ENSMUST00000199426 631 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.96□□□□□ -1.93
Col1a1P11087 Gm37393-201ENSMUST00000195118 3870 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col1a1P11087 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col1a1P11087 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col1a1P11087 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.96□□□□□ -1.94
Col1a1P11087 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Gm43804-201ENSMUST00000198280 456 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Gm44431-201ENSMUST00000203500 413 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Gm4528-201ENSMUST00000207905 551 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 AC122295.1-201ENSMUST00000223476 388 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.96□□□□□ -1.94
Col1a1P11087 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col1a1P11087 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col1a1P11087 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col1a1P11087 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col1a1P11087 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Col1a1P11087 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col1a1P11087 Gm24671-201ENSMUST00000104159 158 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 Gm14977-201ENSMUST00000121626 812 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Col1a1P11087 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.95□□□□□ -1.94
Col1a1P11087 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Col1a1P11087 Gm19427-201ENSMUST00000183619 208 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 Trbv27-201ENSMUST00000193711 277 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 Gm18327-201ENSMUST00000202426 830 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 Gm19253-201ENSMUST00000204279 307 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Col1a1P11087 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.95□□□□□ -1.94
Col1a1P11087 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Col1a1P11087 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Col1a1P11087 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col1a1P11087 Gm12871-201ENSMUST00000118758 438 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.94□□□□□ -1.94
Col1a1P11087 Gm27762-201ENSMUST00000183417 109 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm28596-201ENSMUST00000185870 696 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm32295-201ENSMUST00000192558 696 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.94□□□□□ -1.94
Col1a1P11087 Gm31260-201ENSMUST00000193478 696 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC2.94□□□□□ -1.94
Col1a1P11087 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.94□□□□□ -1.94
Col1a1P11087 Gm18871-201ENSMUST00000218655 745 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC2.94□□□□□ -1.94
Col1a1P11087 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 AC154270.1-201ENSMUST00000227226 426 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col1a1P11087 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm37899-201ENSMUST00000193116 8717 ntBASIC2.94□□□□□ -1.94
Col1a1P11087 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Col1a1P11087 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Col1a1P11087 Mir290a-201ENSMUST00000104627 83 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm14930-201ENSMUST00000118864 652 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm12956-201ENSMUST00000122184 414 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.93□□□□□ -1.94
Col1a1P11087 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.93□□□□□ -1.94
Col1a1P11087 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.93□□□□□ -1.94
Col1a1P11087 Gm24771-201ENSMUST00000158508 137 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm29556-201ENSMUST00000187591 696 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm9696-202ENSMUST00000191541 830 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm37837-201ENSMUST00000191743 604 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm38311-201ENSMUST00000192945 165 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.93□□□□□ -1.94
Col1a1P11087 AC123658.1-201ENSMUST00000228364 867 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Gm9818-201ENSMUST00000050900 255 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col1a1P11087 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col1a1P11087 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col1a1P11087 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.93□□□□□ -1.94
Col1a1P11087 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col1a1P11087 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col1a1P11087 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col1a1P11087 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col1a1P11087 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.92□□□□□ -1.94
Col1a1P11087 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.92□□□□□ -1.94
Col1a1P11087 Gm26411-201ENSMUST00000157668 107 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms