Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.37□□□□□ -1.71
Best1O88870 Gm5958-201ENSMUST00000147698 297 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm22601-201ENSMUST00000157595 250 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm22597-201ENSMUST00000157602 80 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm25605-201ENSMUST00000158364 124 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm23023-201ENSMUST00000158767 109 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Best1O88870 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Best1O88870 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.37□□□□□ -1.71
Best1O88870 Mir5129-201ENSMUST00000174938 78 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.37□□□□□ -1.71
Best1O88870 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Best1O88870 Gm27308-201ENSMUST00000184807 233 ntBASIC4.37□□□□□ -1.71
Best1O88870 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC4.37□□□□□ -1.71
Best1O88870 Gm29330-201ENSMUST00000190032 699 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm28098-201ENSMUST00000191361 699 ntBASIC4.37□□□□□ -1.71
Best1O88870 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm43710-201ENSMUST00000199583 452 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm44011-201ENSMUST00000203336 394 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.37□□□□□ -1.71
Best1O88870 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.37□□□□□ -1.71
Best1O88870 Gm45105-201ENSMUST00000207824 397 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm46190-201ENSMUST00000219650 427 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm18113-201ENSMUST00000220630 303 ntBASIC4.37□□□□□ -1.71
Best1O88870 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.37□□□□□ -1.71
Best1O88870 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Best1O88870 Gm23650-201ENSMUST00000083355 70 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm22155-201ENSMUST00000083836 162 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Best1O88870 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.37□□□□□ -1.71
Best1O88870 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Best1O88870 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.37□□□□□ -1.71
Best1O88870 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Best1O88870 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Best1O88870 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Best1O88870 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Gm23193-201ENSMUST00000102427 82 ntBASIC4.36□□□□□ -1.71
Best1O88870 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Best1O88870 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Best1O88870 Gm11576-201ENSMUST00000117433 417 ntBASIC4.36□□□□□ -1.71
Best1O88870 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Gm14619-201ENSMUST00000120480 168 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm13419-201ENSMUST00000121711 271 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm13232-201ENSMUST00000121816 632 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Gm25559-201ENSMUST00000157182 74 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm25913-201ENSMUST00000157617 135 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm20534-201ENSMUST00000172957 172 ntBASIC4.36□□□□□ -1.71
Best1O88870 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC4.36□□□□□ -1.71
Best1O88870 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Gm6214-201ENSMUST00000178845 541 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm22631-201ENSMUST00000179656 94 ntBASIC4.36□□□□□ -1.71
Best1O88870 Mir6391-201ENSMUST00000184391 104 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.36□□□□□ -1.71
Best1O88870 Gm37869-201ENSMUST00000193385 595 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm9236-201ENSMUST00000196892 587 ntBASIC4.36□□□□□ -1.71
Best1O88870 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.36□□□□□ -1.71
Best1O88870 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.36□□□□□ -1.71
Best1O88870 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.36□□□□□ -1.71
Best1O88870 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.36□□□□□ -1.71
Best1O88870 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.36□□□□□ -1.71
Best1O88870 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.36□□□□□ -1.71
Best1O88870 CT010480.1-201ENSMUST00000223612 363 ntBASIC4.36□□□□□ -1.71
Best1O88870 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.36□□□□□ -1.71
Best1O88870 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Best1O88870 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Gm23099-201ENSMUST00000083454 139 ntBASIC4.36□□□□□ -1.71
Best1O88870 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Best1O88870 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.36□□□□□ -1.71
Best1O88870 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Best1O88870 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Best1O88870 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Best1O88870 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Best1O88870 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.35□□□□□ -1.71
Best1O88870 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Best1O88870 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Best1O88870 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Best1O88870 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Best1O88870 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.35□□□□□ -1.71
Best1O88870 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Best1O88870 Gm15988-201ENSMUST00000118677 367 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm15603-201ENSMUST00000119252 492 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.35□□□□□ -1.71
Best1O88870 Gm22849-201ENSMUST00000157713 307 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm16134-201ENSMUST00000161714 336 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Best1O88870 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.35□□□□□ -1.71
Best1O88870 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.35□□□□□ -1.71
Best1O88870 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Best1O88870 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Best1O88870 Gm11395-201ENSMUST00000181011 499 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm11394-201ENSMUST00000181421 517 ntBASIC4.35□□□□□ -1.71
Best1O88870 Gm29228-201ENSMUST00000185489 418 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms