Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm17781-201ENSMUST00000195232 649 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Gm43669-201ENSMUST00000198229 436 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Gm17951-201ENSMUST00000198536 496 ntBASIC4□□□□□ -1.77
Lmx1bO88609 AC133189.1-201ENSMUST00000198820 140 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Gm44468-201ENSMUST00000199516 105 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Gm7751-201ENSMUST00000212868 709 ntBASIC4□□□□□ -1.77
Lmx1bO88609 AL669916.5-201ENSMUST00000214874 361 ntBASIC4□□□□□ -1.77
Lmx1bO88609 AC125531.1-201ENSMUST00000219849 221 ntBASIC4□□□□□ -1.77
Lmx1bO88609 AC239878.2-201ENSMUST00000224048 464 ntBASIC4□□□□□ -1.77
Lmx1bO88609 AC158142.1-201ENSMUST00000226721 416 ntBASIC4□□□□□ -1.77
Lmx1bO88609 AC115878.1-201ENSMUST00000227247 334 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4□□□□□ -1.77
Lmx1bO88609 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lmx1bO88609 Mir346-201ENSMUST00000083547 98 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4□□□□□ -1.77
Lmx1bO88609 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4□□□□□ -1.77
Lmx1bO88609 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Gm42528-201ENSMUST00000200697 3418 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Lmx1bO88609 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Lmx1bO88609 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4□□□□□ -1.77
Lmx1bO88609 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4□□□□□ -1.77
Lmx1bO88609 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm12053-201ENSMUST00000119022 252 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm23789-201ENSMUST00000122536 301 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm8121-201ENSMUST00000153583 499 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm23905-201ENSMUST00000157568 109 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm22597-201ENSMUST00000157602 80 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm22211-201ENSMUST00000158097 156 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm13249-201ENSMUST00000177803 345 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm13144-201ENSMUST00000179385 345 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm28283-201ENSMUST00000185509 178 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm8747-201ENSMUST00000195392 751 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm43604-201ENSMUST00000199799 705 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm45375-201ENSMUST00000210338 280 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm45434-201ENSMUST00000210550 293 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.99□□□□□ -1.77
Lmx1bO88609 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.99□□□□□ -1.77
Lmx1bO88609 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm22508-201ENSMUST00000082772 110 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm24522-201ENSMUST00000083964 108 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Olfr203-201ENSMUST00000089305 924 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.99□□□□□ -1.77
Lmx1bO88609 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
Lmx1bO88609 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lmx1bO88609 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm26156-201ENSMUST00000116999 123 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm14240-201ENSMUST00000120353 546 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm22208-201ENSMUST00000122658 110 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm22038-201ENSMUST00000157277 242 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm23743-201ENSMUST00000157389 274 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm23855-201ENSMUST00000158377 135 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm25264-201ENSMUST00000158519 117 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm22859-201ENSMUST00000174978 122 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Mir6382-201ENSMUST00000184055 110 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm28098-201ENSMUST00000191361 699 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm18403-201ENSMUST00000192907 529 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Lmx1bO88609 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm43214-201ENSMUST00000199242 352 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm2059-201ENSMUST00000212025 287 ntBASIC3.98□□□□□ -1.77
Lmx1bO88609 Gm5023-201ENSMUST00000217442 587 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms