Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm45588-201ENSMUST00000211213 630 ntBASIC2.57□□□□□ -2
Col5a1O88207 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.57□□□□□ -2
Col5a1O88207 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col5a1O88207 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col5a1O88207 Olfr1160-201ENSMUST00000099839 960 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.57□□□□□ -2
Col5a1O88207 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col5a1O88207 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col5a1O88207 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.57□□□□□ -2
Col5a1O88207 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col5a1O88207 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Col5a1O88207 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col5a1O88207 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Col5a1O88207 Mir669d-201ENSMUST00000104644 121 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Gm14142-201ENSMUST00000117833 296 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm15195-201ENSMUST00000118775 263 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm7350-201ENSMUST00000120964 636 ntBASIC2.56□□□□□ -2
Col5a1O88207 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC2.56□□□□□ -2
Col5a1O88207 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Col5a1O88207 Mir7026-201ENSMUST00000184384 67 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm28974-201ENSMUST00000187893 231 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm37989-201ENSMUST00000195202 803 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col5a1O88207 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col5a1O88207 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.56□□□□□ -2
Col5a1O88207 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col5a1O88207 Mir499-201ENSMUST00000102357 79 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm26015-201ENSMUST00000104402 125 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Gm23441-201ENSMUST00000157268 127 ntBASIC2.56□□□□□ -2
Col5a1O88207 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col5a1O88207 Gm25470-201ENSMUST00000175576 111 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Gm27220-201ENSMUST00000183453 262 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.56□□□□□ -2
Col5a1O88207 Gm37543-201ENSMUST00000192443 1031 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm38334-201ENSMUST00000195060 313 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm44387-201ENSMUST00000196298 145 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm43393-201ENSMUST00000200147 194 ntBASIC2.56□□□□□ -2
Col5a1O88207 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col5a1O88207 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC2.56□□□□□ -2
Col5a1O88207 AC154562.1-201ENSMUST00000226140 966 ntBASIC2.56□□□□□ -2
Col5a1O88207 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.56□□□□□ -2
Col5a1O88207 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col5a1O88207 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.56□□□□□ -2
Col5a1O88207 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col5a1O88207 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Col5a1O88207 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Col5a1O88207 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col5a1O88207 Gm12954-201ENSMUST00000118610 611 ntBASIC2.55□□□□□ -2
Col5a1O88207 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Col5a1O88207 Gm13511-201ENSMUST00000121167 363 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm25047-201ENSMUST00000122667 104 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm23467-201ENSMUST00000157127 159 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm23895-201ENSMUST00000158108 160 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm24879-201ENSMUST00000158386 143 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm23409-201ENSMUST00000158516 237 ntBASIC2.55□□□□□ -2
Col5a1O88207 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.55□□□□□ -2
Col5a1O88207 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Col5a1O88207 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.55□□□□□ -2
Col5a1O88207 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col5a1O88207 Gm37807-201ENSMUST00000194310 190 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.55□□□□□ -2
Col5a1O88207 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm43476-201ENSMUST00000197873 405 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm43384-201ENSMUST00000200569 637 ntBASIC2.55□□□□□ -2
Col5a1O88207 Gm45551-201ENSMUST00000211459 928 ntBASIC2.55□□□□□ -2
Col5a1O88207 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC2.55□□□□□ -2
Col5a1O88207 AC132121.1-201ENSMUST00000220774 332 ntBASIC2.55□□□□□ -2
Col5a1O88207 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col5a1O88207 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col5a1O88207 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.55□□□□□ -2
Col5a1O88207 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Col5a1O88207 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col5a1O88207 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col5a1O88207 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col5a1O88207 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm23424-201ENSMUST00000103889 110 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm4910-201ENSMUST00000119605 366 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.54□□□□□ -2
Col5a1O88207 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC2.54□□□□□ -2
Col5a1O88207 Gm23229-201ENSMUST00000157297 105 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm26355-201ENSMUST00000158220 105 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm27959-201ENSMUST00000185172 111 ntBASIC2.54□□□□□ -2
Col5a1O88207 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.54□□□□□ -2
Col5a1O88207 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.54□□□□□ -2
Col5a1O88207 Gm38280-201ENSMUST00000192610 158 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm43415-201ENSMUST00000201934 750 ntBASIC2.54□□□□□ -2
Col5a1O88207 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.54□□□□□ -2
Col5a1O88207 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms