Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm3852-201ENSMUST00000182781 264 ntBASIC2.4□□□□□ -2.03
Cacna1bO55017 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Cacna1bO55017 Mir6925-201ENSMUST00000197857 70 ntBASIC2.4□□□□□ -2.03
Cacna1bO55017 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.4□□□□□ -2.03
Cacna1bO55017 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.4□□□□□ -2.03
Cacna1bO55017 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cacna1bO55017 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cacna1bO55017 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cacna1bO55017 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cacna1bO55017 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm22330-201ENSMUST00000158068 115 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm8338-201ENSMUST00000163928 363 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm45778-201ENSMUST00000211959 153 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm45772-201ENSMUST00000212961 240 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 AC132446.1-201ENSMUST00000222655 226 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm12941-201ENSMUST00000117934 220 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm14768-201ENSMUST00000122126 678 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm26004-201ENSMUST00000158804 116 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm25069-201ENSMUST00000175238 86 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm23617-201ENSMUST00000175410 95 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Mir6363-201ENSMUST00000184880 114 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm4528-201ENSMUST00000207905 551 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm36247-201ENSMUST00000211834 285 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cacna1bO55017 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm7117-201ENSMUST00000071515 387 ntBASIC2.39□□□□□ -2.03
Cacna1bO55017 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cacna1bO55017 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cacna1bO55017 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cacna1bO55017 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm11446-201ENSMUST00000121319 866 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm21999-201ENSMUST00000165985 387 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cacna1bO55017 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm19253-201ENSMUST00000204279 307 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm45395-201ENSMUST00000209891 559 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cacna1bO55017 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cacna1bO55017 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.38□□□□□ -2.03
Cacna1bO55017 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.38□□□□□ -2.03
Cacna1bO55017 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.37□□□□□ -2.03
Cacna1bO55017 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm16561-201ENSMUST00000163001 192 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm17711-201ENSMUST00000172028 237 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm22192-201ENSMUST00000175128 85 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm38356-201ENSMUST00000194313 408 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm18015-201ENSMUST00000214879 316 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC2.37□□□□□ -2.03
Cacna1bO55017 AC122295.1-201ENSMUST00000223476 388 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Snord14e-201ENSMUST00000082857 90 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm25632-201ENSMUST00000083112 85 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cacna1bO55017 Snora33-201ENSMUST00000093556 129 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cacna1bO55017 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cacna1bO55017 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cacna1bO55017 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm25421-201ENSMUST00000104218 164 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Mir344e-201ENSMUST00000104677 66 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm37684-201ENSMUST00000192779 355 ntBASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.37□□□□□ -2.03
Cacna1bO55017 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cacna1bO55017 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cacna1bO55017 Gm22116-201ENSMUST00000158791 141 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm18026-201ENSMUST00000222789 727 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cacna1bO55017 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cacna1bO55017 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cacna1bO55017 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cacna1bO55017 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cacna1bO55017 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cacna1bO55017 Mir294-201ENSMUST00000104710 84 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm22361-201ENSMUST00000158435 176 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm18953-201ENSMUST00000175694 300 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.36□□□□□ -2.03
Cacna1bO55017 Gm43722-201ENSMUST00000196054 124 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms