Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm21070-201ENSMUST00000182425 985 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Mir6943-201ENSMUST00000185186 66 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm28785-201ENSMUST00000187478 379 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm43245-201ENSMUST00000197603 468 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm43559-201ENSMUST00000198755 466 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm5551-201ENSMUST00000199720 690 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm45226-201ENSMUST00000206602 288 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm44650-201ENSMUST00000206929 194 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm8785-201ENSMUST00000220259 487 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 AC114916.1-201ENSMUST00000228465 494 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm24626-201ENSMUST00000082621 161 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trav13d-3J3QMG8 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm25765-201ENSMUST00000104100 132 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm11923-201ENSMUST00000118135 508 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm8858-201ENSMUST00000118259 342 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm11260-201ENSMUST00000121163 942 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm22561-201ENSMUST00000157331 84 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm23591-201ENSMUST00000157663 286 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm22120-201ENSMUST00000175590 70 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm43155-201ENSMUST00000202661 494 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm45031-201ENSMUST00000206800 288 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm45048-201ENSMUST00000207058 429 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm18116-201ENSMUST00000220920 537 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Snord21-201ENSMUST00000082519 94 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Trav13d-3J3QMG8 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.34□□□□□ -1.88
Trav13d-3J3QMG8 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.34□□□□□ -1.88
Trav13d-3J3QMG8 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Trav13d-3J3QMG8 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.34□□□□□ -1.88
Trav13d-3J3QMG8 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
Trav13d-3J3QMG8 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.34□□□□□ -1.88
Trav13d-3J3QMG8 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Trav13d-3J3QMG8 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Gm25563-201ENSMUST00000104603 74 ntBASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Gm14753-201ENSMUST00000118503 246 ntBASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Gm11869-201ENSMUST00000118701 329 ntBASIC3.33□□□□□ -1.88
Trav13d-3J3QMG8 Gm15060-201ENSMUST00000119550 948 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms