Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm44212-201ENSMUST00000205016 897 ntBASIC3.3□□□□□ -1.88
Scn7aB1AYL1 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.3□□□□□ -1.88
Scn7aB1AYL1 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.3□□□□□ -1.88
Scn7aB1AYL1 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Gm12954-201ENSMUST00000118610 611 ntBASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Gm17194-201ENSMUST00000164610 348 ntBASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn7aB1AYL1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Gm26015-201ENSMUST00000104402 125 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Gm14843-201ENSMUST00000119596 212 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Gm13555-201ENSMUST00000121668 319 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Gm22099-201ENSMUST00000157925 123 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Gm23152-201ENSMUST00000175322 116 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.28□□□□□ -1.88
Scn7aB1AYL1 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm11363-201ENSMUST00000121672 548 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm16533-201ENSMUST00000140035 228 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm8580-201ENSMUST00000160295 464 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Snord53-201ENSMUST00000175146 78 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm25820-202ENSMUST00000197479 128 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm26001-201ENSMUST00000157989 103 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm26171-201ENSMUST00000158422 131 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm44092-201ENSMUST00000204470 258 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn7aB1AYL1 AF357341-201ENSMUST00000083088 75 ntBASIC3.27□□□□□ -1.89
Scn7aB1AYL1 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm27399-201ENSMUST00000184250 78 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm29552-201ENSMUST00000190548 660 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm45105-201ENSMUST00000207824 397 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm3690-201ENSMUST00000211341 262 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm30674-201ENSMUST00000214523 392 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Gm7753-201ENSMUST00000221007 867 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn7aB1AYL1 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm23011-201ENSMUST00000104148 132 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm23551-201ENSMUST00000116852 121 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm13862-201ENSMUST00000121220 197 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm14977-201ENSMUST00000121626 812 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm13440-201ENSMUST00000121665 496 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm13419-201ENSMUST00000121711 271 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm24532-201ENSMUST00000157951 286 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm24212-201ENSMUST00000158258 132 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm28146-201ENSMUST00000185517 701 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm5268-201ENSMUST00000189212 940 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm17893-201ENSMUST00000203017 770 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm18871-201ENSMUST00000218655 745 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm25628-201ENSMUST00000084002 105 ntBASIC3.25□□□□□ -1.89
Scn7aB1AYL1 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.24□□□□□ -1.89
Scn7aB1AYL1 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.24□□□□□ -1.89
Scn7aB1AYL1 Gm15074-201ENSMUST00000117603 936 ntBASIC3.24□□□□□ -1.89
Scn7aB1AYL1 Gm14119-201ENSMUST00000119511 235 ntBASIC3.24□□□□□ -1.89
Scn7aB1AYL1 Gm16017-201ENSMUST00000119834 208 ntBASIC3.24□□□□□ -1.89
Scn7aB1AYL1 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Scn7aB1AYL1 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn7aB1AYL1 Gm22084-201ENSMUST00000157585 105 ntBASIC3.24□□□□□ -1.89
Scn7aB1AYL1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms