Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Mir7687-201ENSMUST00000184722 59 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Mir7028-201ENSMUST00000185016 64 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm29596-201ENSMUST00000185710 385 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm5329-201ENSMUST00000186898 463 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm36259-201ENSMUST00000197340 392 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm44768-201ENSMUST00000205719 393 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm17811-201ENSMUST00000206193 387 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC5.36□□□□□ -1.55
Nubp1Q9R060 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm9818-201ENSMUST00000050900 255 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.36□□□□□ -1.55
Nubp1Q9R060 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.36□□□□□ -1.55
Nubp1Q9R060 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Nubp1Q9R060 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Thap6-201ENSMUST00000191860 3151 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm12617-201ENSMUST00000121268 381 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm16164-201ENSMUST00000160078 468 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm22450-201ENSMUST00000179641 107 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm24264-201ENSMUST00000179835 94 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm25473-201ENSMUST00000180191 107 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Mir6362-201ENSMUST00000184329 107 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm6543-201ENSMUST00000197353 808 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm2607-201ENSMUST00000212389 627 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm18188-201ENSMUST00000219386 478 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 AC154282.1-201ENSMUST00000223154 265 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm22062-201ENSMUST00000082563 107 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm26071-201ENSMUST00000083261 107 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm24521-201ENSMUST00000083958 107 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.35□□□□□ -1.55
Nubp1Q9R060 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nubp1Q9R060 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm15297-201ENSMUST00000117795 290 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm8545-201ENSMUST00000120692 801 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm13533-201ENSMUST00000121104 177 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm11804-201ENSMUST00000121663 468 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm22027-201ENSMUST00000122737 127 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm26372-201ENSMUST00000157831 236 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm25162-201ENSMUST00000158906 159 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm16269-201ENSMUST00000160532 409 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm23415-201ENSMUST00000175519 83 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm23002-201ENSMUST00000179221 107 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Mir6540-201ENSMUST00000184886 108 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm3841-201ENSMUST00000191399 451 ntBASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nubp1Q9R060 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.34□□□□□ -1.55
Nubp1Q9R060 AC154276.2-201ENSMUST00000227707 309 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms