Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm23733-201ENSMUST00000083750 106 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm25764-201ENSMUST00000104092 134 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm13064-201ENSMUST00000119125 557 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm12891-201ENSMUST00000119358 240 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm6071-201ENSMUST00000119561 440 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm15926-201ENSMUST00000120492 550 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm24898-201ENSMUST00000158133 106 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm24553-201ENSMUST00000158653 131 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm17159-201ENSMUST00000169043 482 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm11392-201ENSMUST00000181419 710 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm28924-201ENSMUST00000190012 241 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm37817-201ENSMUST00000195276 434 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm43407-201ENSMUST00000199816 317 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm44521-201ENSMUST00000206469 217 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 AC124399.1-201ENSMUST00000218334 590 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm23518-201ENSMUST00000082835 153 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Snord14e-201ENSMUST00000082857 90 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim54Q9ERP3 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.21□□□□□ -1.73
Trim54Q9ERP3 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm14669-201ENSMUST00000118841 250 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm14915-201ENSMUST00000120747 204 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm11321-201ENSMUST00000121257 902 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm14845-201ENSMUST00000121259 306 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm25572-201ENSMUST00000157527 172 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm22840-201ENSMUST00000158444 136 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm23198-201ENSMUST00000158811 91 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm27189-201ENSMUST00000184119 190 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm17781-201ENSMUST00000195232 649 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm43489-201ENSMUST00000196810 993 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm42758-201ENSMUST00000202146 283 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm44294-201ENSMUST00000205090 728 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm7407-201ENSMUST00000208301 568 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm20039-201ENSMUST00000210329 394 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm3829-201ENSMUST00000222362 619 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm26449-201ENSMUST00000082452 104 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm22423-201ENSMUST00000082861 184 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm22868-201ENSMUST00000083955 164 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm16261-201ENSMUST00000096813 205 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim54Q9ERP3 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim54Q9ERP3 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim54Q9ERP3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim54Q9ERP3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms