Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Cdc40Q9DC48 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.06□□□□□ -1.92
Cdc40Q9DC48 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.06□□□□□ -1.92
Cdc40Q9DC48 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.06□□□□□ -1.92
Cdc40Q9DC48 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdc40Q9DC48 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Gm22005-201ENSMUST00000082795 141 ntBASIC3.06□□□□□ -1.92
Cdc40Q9DC48 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Gm22864-201ENSMUST00000083950 130 ntBASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Cdc40Q9DC48 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm24118-201ENSMUST00000103972 126 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Mir291a-201ENSMUST00000104815 82 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm12803-201ENSMUST00000118907 821 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm15231-201ENSMUST00000119174 447 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm13574-201ENSMUST00000120482 394 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm26487-201ENSMUST00000158022 94 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm28439-201ENSMUST00000187714 876 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm6510-201ENSMUST00000195916 574 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm43115-201ENSMUST00000196244 160 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm46194-201ENSMUST00000218136 320 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cdc40Q9DC48 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm11367-201ENSMUST00000117802 120 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm13379-201ENSMUST00000118053 621 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm15142-201ENSMUST00000121013 856 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm14581-201ENSMUST00000121726 198 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm10075-201ENSMUST00000162030 545 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm3123-201ENSMUST00000163480 480 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm8161-201ENSMUST00000168739 481 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm24819-201ENSMUST00000175094 166 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm44300-201ENSMUST00000196792 121 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm17937-201ENSMUST00000197908 742 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm42976-201ENSMUST00000200313 222 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm42474-201ENSMUST00000201073 505 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm7946-201ENSMUST00000203326 958 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm44600-201ENSMUST00000208540 111 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm17917-201ENSMUST00000218561 953 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 LOC667541-201ENSMUST00000223408 278 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Gm23850-201ENSMUST00000083830 169 ntBASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cdc40Q9DC48 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm14627-201ENSMUST00000118931 567 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm12412-201ENSMUST00000121867 328 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm22478-201ENSMUST00000122570 154 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm23391-201ENSMUST00000157579 104 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Mir3106-201ENSMUST00000175401 82 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm26988-201ENSMUST00000183296 945 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm29576-201ENSMUST00000188020 678 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms