Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm22497-201ENSMUST00000104499 131 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Mir291a-201ENSMUST00000104815 82 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm6429-201ENSMUST00000117144 475 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm14795-201ENSMUST00000118461 471 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm11708-201ENSMUST00000119530 832 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm24914-201ENSMUST00000157285 313 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm24854-201ENSMUST00000158025 98 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm6501-201ENSMUST00000187178 916 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm9541-201ENSMUST00000188409 502 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm8242-202ENSMUST00000193056 475 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm43115-201ENSMUST00000196244 160 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm19253-201ENSMUST00000204279 307 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm6842-201ENSMUST00000211361 390 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.19□□□□□ -1.9
Chmp2aQ9DB34 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Mir1198-201ENSMUST00000116995 121 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm15161-201ENSMUST00000117340 387 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm12739-201ENSMUST00000119769 382 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm8840-201ENSMUST00000122454 386 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm16274-201ENSMUST00000139251 592 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm24213-201ENSMUST00000158255 258 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm18520-201ENSMUST00000174783 658 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm20651-201ENSMUST00000177219 329 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm44266-201ENSMUST00000205235 500 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm44665-201ENSMUST00000205381 251 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm18015-201ENSMUST00000214879 316 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm22444-201ENSMUST00000093693 108 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.18□□□□□ -1.9
Chmp2aQ9DB34 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Mir804-201ENSMUST00000103251 95 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm14537-201ENSMUST00000117464 599 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm14987-201ENSMUST00000117820 676 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm25198-201ENSMUST00000178574 110 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm26297-201ENSMUST00000179464 132 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm28146-201ENSMUST00000185517 701 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm3933-201ENSMUST00000195391 439 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm18433-202ENSMUST00000195682 196 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm23850-201ENSMUST00000083830 169 ntBASIC3.17□□□□□ -1.9
Chmp2aQ9DB34 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm24982-201ENSMUST00000104456 132 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm24831-201ENSMUST00000116778 126 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm14162-201ENSMUST00000121985 601 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21842-201ENSMUST00000177552 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21626-201ENSMUST00000177791 498 ntBASIC3.16□□□□□ -1.9
Chmp2aQ9DB34 Gm21562-201ENSMUST00000177888 498 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms