Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Mir883a-201ENSMUST00000104824 76 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm13454-201ENSMUST00000118166 483 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm6058-201ENSMUST00000154261 399 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm22769-201ENSMUST00000158367 98 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm43541-201ENSMUST00000197208 581 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm44254-201ENSMUST00000204184 322 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gm44703-201ENSMUST00000205724 248 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Mir463-201ENSMUST00000093570 75 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Olfr713-201ENSMUST00000098139 975 ntBASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Vps28Q9D1C8 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm25414-201ENSMUST00000101814 107 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm26002-201ENSMUST00000101915 107 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm25420-201ENSMUST00000104216 127 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm23957-201ENSMUST00000157209 90 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm22219-201ENSMUST00000157562 319 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm24014-201ENSMUST00000157728 157 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm24930-201ENSMUST00000158315 83 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm24550-201ENSMUST00000158648 279 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm26460-201ENSMUST00000175061 126 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm27580-201ENSMUST00000183666 149 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm37239-201ENSMUST00000193510 141 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm37533-201ENSMUST00000193848 545 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm44343-201ENSMUST00000196702 90 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm5551-201ENSMUST00000199720 690 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm3829-201ENSMUST00000222362 619 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm25800-201ENSMUST00000082636 134 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm23733-201ENSMUST00000083750 106 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Vps28Q9D1C8 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Vps28Q9D1C8 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms