Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm8676-201ENSMUST00000184206 637 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm27952-201ENSMUST00000184748 105 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm28925-201ENSMUST00000188586 168 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm8790-201ENSMUST00000194108 322 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm7449-201ENSMUST00000194393 663 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm18120-201ENSMUST00000220079 511 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ddx28Q9CWT6 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Mir667-201ENSMUST00000102441 92 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm24120-201ENSMUST00000103978 129 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm13268-201ENSMUST00000117485 433 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm14541-201ENSMUST00000118985 157 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm9078-201ENSMUST00000119126 617 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm13273-201ENSMUST00000119737 159 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm11830-201ENSMUST00000120175 561 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm8244-201ENSMUST00000121254 264 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm23885-201ENSMUST00000122682 294 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm25427-201ENSMUST00000157605 103 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm26045-201ENSMUST00000157862 97 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm2862-201ENSMUST00000161524 328 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm17054-201ENSMUST00000169811 259 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm28356-202ENSMUST00000187566 858 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm28648-201ENSMUST00000190092 343 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm36966-201ENSMUST00000192217 413 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm43582-201ENSMUST00000196149 343 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm43853-201ENSMUST00000197162 301 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm26121-201ENSMUST00000083364 162 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Mir346-201ENSMUST00000083547 98 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ddx28Q9CWT6 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm4736-201ENSMUST00000100870 380 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm23273-201ENSMUST00000104058 135 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm26273-201ENSMUST00000104180 131 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm12294-201ENSMUST00000119723 490 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm25104-201ENSMUST00000122476 163 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm23753-201ENSMUST00000157575 149 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm24014-201ENSMUST00000157728 157 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm25334-201ENSMUST00000158036 110 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm23025-201ENSMUST00000158769 111 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm26362-201ENSMUST00000158865 315 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm7241-201ENSMUST00000159853 357 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm23269-201ENSMUST00000178701 107 ntBASIC3.56□□□□□ -1.84
Ddx28Q9CWT6 Gm27828-201ENSMUST00000184108 119 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms