Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm44266-201ENSMUST00000205235 500 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm45327-201ENSMUST00000211612 565 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm2710-201ENSMUST00000073196 603 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Gm25630-201ENSMUST00000084000 162 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Smc1aQ9CU62 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Smc1aQ9CU62 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Smc1aQ9CU62 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.84□□□□□ -1.8
Smc1aQ9CU62 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm23530-201ENSMUST00000104564 137 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm15231-201ENSMUST00000119174 447 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm24060-201ENSMUST00000157494 95 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm23583-201ENSMUST00000158533 289 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm3025-201ENSMUST00000163454 489 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm2878-201ENSMUST00000170173 486 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm27249-201ENSMUST00000185049 328 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm44727-201ENSMUST00000204225 451 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm30674-201ENSMUST00000214523 392 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm24533-201ENSMUST00000083138 196 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.83□□□□□ -1.8
Smc1aQ9CU62 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.83□□□□□ -1.8
Smc1aQ9CU62 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm14973-201ENSMUST00000117248 255 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm14554-201ENSMUST00000119548 661 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm16017-201ENSMUST00000119834 208 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm11876-201ENSMUST00000120002 269 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm12578-201ENSMUST00000121244 417 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm4540-201ENSMUST00000170669 429 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm27648-201ENSMUST00000184315 107 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Mir6914-201ENSMUST00000184999 69 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm20776-201ENSMUST00000189940 700 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm10237-201ENSMUST00000078393 273 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm26439-201ENSMUST00000082592 106 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 AF357341-201ENSMUST00000083088 75 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm23297-201ENSMUST00000083184 127 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm22293-201ENSMUST00000083314 109 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.82□□□□□ -1.8
Smc1aQ9CU62 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Smc1aQ9CU62 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Mir667-201ENSMUST00000102441 92 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm12125-201ENSMUST00000117261 736 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm3470-201ENSMUST00000160819 420 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm4479-201ENSMUST00000178807 171 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm20574-201ENSMUST00000182867 917 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm38018-201ENSMUST00000195651 540 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm7946-201ENSMUST00000203326 958 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm44084-201ENSMUST00000203947 409 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 Gm43954-201ENSMUST00000204634 544 ntBASIC3.81□□□□□ -1.8
Smc1aQ9CU62 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Smc1aQ9CU62 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms