Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Mir592-201ENSMUST00000102113 96 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm24117-201ENSMUST00000103973 133 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm23709-201ENSMUST00000104364 130 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm6062-201ENSMUST00000120462 631 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm3362-201ENSMUST00000148102 466 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm24251-201ENSMUST00000157324 114 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm23496-201ENSMUST00000157741 248 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm24751-201ENSMUST00000157844 102 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm24499-201ENSMUST00000158446 104 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm23312-201ENSMUST00000158774 102 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm4222-201ENSMUST00000165784 470 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm7925-201ENSMUST00000166690 401 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm20673-201ENSMUST00000177167 430 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm24464-201ENSMUST00000179697 107 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm28408-201ENSMUST00000191557 463 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm44474-201ENSMUST00000196525 127 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm43144-201ENSMUST00000198256 485 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm3010-201ENSMUST00000198805 448 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm44161-201ENSMUST00000203532 253 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm45007-201ENSMUST00000206237 366 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm45857-201ENSMUST00000212207 356 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 AC167140.1-201ENSMUST00000224710 403 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.34□□□□□ -1.71
Clrn1Q8K445 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Clrn1Q8K445 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Clrn1Q8K445 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Clrn1Q8K445 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Clrn1Q8K445 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.34□□□□□ -1.72
Clrn1Q8K445 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm11813-201ENSMUST00000118586 291 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm7219-201ENSMUST00000119619 297 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm15112-201ENSMUST00000120152 860 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm15142-201ENSMUST00000121013 856 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm25339-201ENSMUST00000157458 232 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm17152-201ENSMUST00000172430 535 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm27490-201ENSMUST00000184754 128 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm28058-201ENSMUST00000186421 264 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm28163-201ENSMUST00000187099 325 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm18854-201ENSMUST00000211196 329 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm45735-201ENSMUST00000212779 319 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm18442-201ENSMUST00000220925 639 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Snord42a-201ENSMUST00000082606 65 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm23645-201ENSMUST00000083228 108 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.33□□□□□ -1.72
Clrn1Q8K445 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Clrn1Q8K445 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm11556-201ENSMUST00000120751 288 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm5391-201ENSMUST00000121155 613 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm23964-201ENSMUST00000157966 107 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm26034-201ENSMUST00000158154 116 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm22085-201ENSMUST00000158344 110 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm22769-201ENSMUST00000158367 98 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 Gm17148-201ENSMUST00000164702 249 ntBASIC4.32□□□□□ -1.72
Clrn1Q8K445 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms