Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm28802-201ENSMUST00000188624 944 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm37111-201ENSMUST00000193250 634 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm34015-201ENSMUST00000194908 451 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm37418-201ENSMUST00000195031 274 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm35702-201ENSMUST00000198653 511 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm19457-201ENSMUST00000200995 448 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm45317-201ENSMUST00000210385 223 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Rny3-201ENSMUST00000083011 102 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Vps53Q8CCB4 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.71□□□□□ -1.65
Vps53Q8CCB4 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Vps53Q8CCB4 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm23322-201ENSMUST00000104464 167 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm24067-201ENSMUST00000104514 85 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm3940-201ENSMUST00000105087 432 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm15060-201ENSMUST00000119550 948 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm11522-201ENSMUST00000120533 176 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm13092-201ENSMUST00000136346 260 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm23098-201ENSMUST00000157552 299 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm24505-201ENSMUST00000157682 126 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm22135-201ENSMUST00000158752 108 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm20612-201ENSMUST00000176318 236 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm25817-201ENSMUST00000177758 121 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm24766-201ENSMUST00000179182 121 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm43649-201ENSMUST00000196596 391 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm43007-201ENSMUST00000197618 291 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm17887-201ENSMUST00000200194 547 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm45366-201ENSMUST00000209828 384 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm45742-201ENSMUST00000212400 433 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm29809-201ENSMUST00000218423 493 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 AC164117.2-201ENSMUST00000222090 327 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps53Q8CCB4 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm24403-201ENSMUST00000104616 130 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm14890-201ENSMUST00000117660 676 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm12370-201ENSMUST00000117809 604 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm11408-201ENSMUST00000117889 519 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm14927-201ENSMUST00000120283 454 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm15946-201ENSMUST00000160654 423 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm10292-201ENSMUST00000183142 581 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm8151-201ENSMUST00000184817 871 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm19694-201ENSMUST00000192364 505 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm43814-201ENSMUST00000197851 413 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm7786-201ENSMUST00000210494 436 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Gm7380-201ENSMUST00000211599 466 ntBASIC4.7□□□□□ -1.66
Vps53Q8CCB4 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms