Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm12281-201ENSMUST00000119536 298 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm23537-201ENSMUST00000157536 330 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm25223-201ENSMUST00000158200 110 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm25654-201ENSMUST00000158467 88 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm10075-201ENSMUST00000162030 545 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm42459-201ENSMUST00000199679 742 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Gm4321-201ENSMUST00000200520 442 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 AC154994.1-201ENSMUST00000217395 302 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 CT954323.1-201ENSMUST00000222774 229 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim47Q8C0E3 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm25418-201ENSMUST00000104214 129 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm13876-201ENSMUST00000118451 261 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm14753-201ENSMUST00000118503 246 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm22804-201ENSMUST00000158052 101 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm17065-201ENSMUST00000165245 239 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm17183-201ENSMUST00000171170 493 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm25071-201ENSMUST00000175232 70 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Mir7012-201ENSMUST00000183900 64 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm38098-201ENSMUST00000194115 241 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 AC159203.2-201ENSMUST00000221326 193 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm25815-201ENSMUST00000082755 107 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim47Q8C0E3 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm23142-201ENSMUST00000101848 105 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm26240-201ENSMUST00000101893 105 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm14469-201ENSMUST00000118363 202 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm14768-201ENSMUST00000122126 678 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm23993-201ENSMUST00000157478 144 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm28385-201ENSMUST00000185671 292 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm28860-201ENSMUST00000188103 313 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm36382-201ENSMUST00000198892 541 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms