Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf43Q5NCP0 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
Rnf43Q5NCP0 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf43Q5NCP0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf43Q5NCP0 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf43Q5NCP0 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf43Q5NCP0 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.12□□□□□ -1.59
Rnf43Q5NCP0 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm12806-201ENSMUST00000119384 268 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm25058-201ENSMUST00000157365 128 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm23906-201ENSMUST00000157573 128 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm24439-201ENSMUST00000157894 117 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm17109-201ENSMUST00000163985 358 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm17148-201ENSMUST00000164702 249 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Mir7074-201ENSMUST00000183884 63 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Mir6899-201ENSMUST00000184798 64 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm27286-201ENSMUST00000184934 179 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm45616-201ENSMUST00000211711 319 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm23848-201ENSMUST00000083826 106 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Gm25937-201ENSMUST00000083912 107 ntBASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf43Q5NCP0 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm12771-201ENSMUST00000120246 135 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm6062-201ENSMUST00000120462 631 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm24060-201ENSMUST00000157494 95 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm26085-201ENSMUST00000157900 116 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Snora15-201ENSMUST00000177461 131 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm27688-201ENSMUST00000183634 91 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm23925-202ENSMUST00000188429 132 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm37670-201ENSMUST00000193622 229 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm8132-201ENSMUST00000204938 640 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm46997-201ENSMUST00000222108 217 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm23677-201ENSMUST00000083156 104 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Rnf43Q5NCP0 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Rnf43Q5NCP0 Gm12495-201ENSMUST00000119750 447 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms