Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm38311-201ENSMUST00000192945 165 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.26□□□□□ -1.73
Ccdc88bQ4QRL3 Gm6574-201ENSMUST00000120037 362 ntBASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Gm24601-201ENSMUST00000157970 143 ntBASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Gm44370-201ENSMUST00000175436 112 ntBASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Gm14527-201ENSMUST00000179300 639 ntBASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Gm9892-201ENSMUST00000182415 992 ntBASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Gm22622-201ENSMUST00000082870 129 ntBASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc88bQ4QRL3 Mir693-201ENSMUST00000102187 89 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm13880-201ENSMUST00000118421 474 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 AC154297.1-201ENSMUST00000171334 397 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm27898-201ENSMUST00000183987 80 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm19086-201ENSMUST00000190772 665 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm20074-201ENSMUST00000208144 484 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm45678-201ENSMUST00000210509 295 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 AC211878.5-201ENSMUST00000221697 409 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Mir7017-201ENSMUST00000184894 62 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 AC159242.1-201ENSMUST00000225832 194 ntBASIC4.24□□□□□ -1.73
Ccdc88bQ4QRL3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc88bQ4QRL3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc88bQ4QRL3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc88bQ4QRL3 Gm43476-201ENSMUST00000197873 405 ntBASIC4.23□□□□□ -1.73
Ccdc88bQ4QRL3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Ccdc88bQ4QRL3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Gm43379-201ENSMUST00000196253 7726 ntBASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Mir294-201ENSMUST00000104710 84 ntBASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Gm28625-201ENSMUST00000188309 205 ntBASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Gm44694-201ENSMUST00000205317 1298 ntBASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc88bQ4QRL3 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc88bQ4QRL3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 Gm23472-201ENSMUST00000101806 191 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 Gm13511-201ENSMUST00000121167 363 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 Gm24177-201ENSMUST00000158927 131 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 Gm24497-201ENSMUST00000177868 191 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 Gm25939-201ENSMUST00000179876 191 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 AC134335.1-201ENSMUST00000227626 329 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 Gm23444-201ENSMUST00000082922 191 ntBASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ccdc88bQ4QRL3 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm26015-201ENSMUST00000104402 125 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm24379-201ENSMUST00000122695 86 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm8580-201ENSMUST00000160295 464 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm28146-201ENSMUST00000185517 701 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm38008-201ENSMUST00000195333 518 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm37602-201ENSMUST00000195187 3310 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.2□□□□□ -1.74
Ccdc88bQ4QRL3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm11253-201ENSMUST00000118486 201 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm7421-201ENSMUST00000119298 639 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm7365-201ENSMUST00000120877 639 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm22534-201ENSMUST00000158173 104 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm24736-201ENSMUST00000158862 130 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms