Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm26991-201ENSMUST00000180950 620 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm44232-201ENSMUST00000204537 225 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm5322-201ENSMUST00000206142 699 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Mir592-201ENSMUST00000102113 96 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm22019-201ENSMUST00000104359 96 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm14973-201ENSMUST00000117248 255 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm21638-201ENSMUST00000179473 836 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm18403-201ENSMUST00000192907 529 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm38329-201ENSMUST00000193473 427 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm43217-201ENSMUST00000199513 367 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm19244-201ENSMUST00000204340 253 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm6112-201ENSMUST00000208037 629 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm5176-202ENSMUST00000220267 583 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm7204-201ENSMUST00000062591 600 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Mir325-201ENSMUST00000083491 98 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 AF357428-201ENSMUST00000083815 69 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.24□□□□□ -1.89
Upf3bQ3ULL6 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm7853-201ENSMUST00000100708 478 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm15108-201ENSMUST00000116160 803 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm13717-201ENSMUST00000119868 365 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm11797-201ENSMUST00000121336 754 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm15111-201ENSMUST00000122142 878 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm24190-201ENSMUST00000157976 216 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm24854-201ENSMUST00000158025 98 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm27477-201ENSMUST00000184649 143 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm27163-201ENSMUST00000184767 409 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm19232-201ENSMUST00000211621 652 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm24611-201ENSMUST00000083272 107 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Upf3bQ3ULL6 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm25097-201ENSMUST00000104042 145 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm12897-201ENSMUST00000120341 250 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm37288-201ENSMUST00000193963 334 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm34091-201ENSMUST00000200875 604 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm45513-201ENSMUST00000210228 376 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm23297-201ENSMUST00000083184 127 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Mir184-201ENSMUST00000083662 69 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upf3bQ3ULL6 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
Upf3bQ3ULL6 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms