Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm17991-201ENSMUST00000208139 297 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm45530-201ENSMUST00000211658 225 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm25481-201ENSMUST00000083221 158 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm336-201ENSMUST00000186376 1480 ntBASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ssbp4Q3U4B1 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm23256-201ENSMUST00000102235 110 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm26140-201ENSMUST00000103807 110 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm14901-201ENSMUST00000119001 283 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm12433-201ENSMUST00000119659 255 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm11982-201ENSMUST00000121480 314 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm6568-201ENSMUST00000122274 697 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm13852-201ENSMUST00000122350 242 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm13602-201ENSMUST00000122405 493 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm24998-201ENSMUST00000157908 89 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm22733-201ENSMUST00000158094 91 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm25224-201ENSMUST00000158195 68 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm25520-201ENSMUST00000158389 118 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm2862-201ENSMUST00000161524 328 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm22120-201ENSMUST00000175590 70 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm22908-201ENSMUST00000177620 110 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm25817-201ENSMUST00000177758 121 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Mir713-201ENSMUST00000178651 108 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm24766-201ENSMUST00000179182 121 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm27861-201ENSMUST00000183920 214 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm27919-201ENSMUST00000185163 107 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28574-201ENSMUST00000185757 699 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28781-201ENSMUST00000185760 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28339-201ENSMUST00000185845 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29413-201ENSMUST00000186019 880 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29062-201ENSMUST00000186032 694 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29574-201ENSMUST00000186226 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28828-201ENSMUST00000186601 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28057-201ENSMUST00000186603 615 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28255-201ENSMUST00000187101 694 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29307-201ENSMUST00000187367 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28397-201ENSMUST00000187970 699 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29639-201ENSMUST00000188375 580 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28896-201ENSMUST00000188609 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29545-201ENSMUST00000188878 694 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29339-201ENSMUST00000189613 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm28159-201ENSMUST00000190296 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29366-201ENSMUST00000190481 699 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm29407-201ENSMUST00000191468 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Trbv22-201ENSMUST00000191697 291 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm38107-201ENSMUST00000194873 696 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm37418-201ENSMUST00000195031 274 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm42805-201ENSMUST00000196158 276 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm42465-201ENSMUST00000197036 492 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm18429-201ENSMUST00000198707 421 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms