Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm12486-201ENSMUST00000120887 541 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23743-201ENSMUST00000157389 274 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22101-201ENSMUST00000157928 103 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22135-201ENSMUST00000158752 108 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22258-201ENSMUST00000177645 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26502-201ENSMUST00000177732 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25350-201ENSMUST00000177849 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23446-201ENSMUST00000177977 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26201-201ENSMUST00000178047 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm24711-201ENSMUST00000178062 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm24609-201ENSMUST00000178166 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23265-201ENSMUST00000178321 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22812-201ENSMUST00000178329 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26246-201ENSMUST00000178388 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22131-201ENSMUST00000178415 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25155-201ENSMUST00000178450 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm24760-201ENSMUST00000178530 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26032-201ENSMUST00000178535 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22285-201ENSMUST00000178576 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22776-201ENSMUST00000178634 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22417-201ENSMUST00000178656 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26270-201ENSMUST00000178690 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25074-201ENSMUST00000178782 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25210-201ENSMUST00000178813 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25157-201ENSMUST00000178914 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23313-201ENSMUST00000178931 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23089-201ENSMUST00000178947 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22046-201ENSMUST00000179027 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23767-201ENSMUST00000179278 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm24153-201ENSMUST00000179280 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25597-201ENSMUST00000179388 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22941-201ENSMUST00000179630 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22631-201ENSMUST00000179656 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25816-201ENSMUST00000179764 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26188-201ENSMUST00000179963 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm25471-201ENSMUST00000180126 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26433-201ENSMUST00000180227 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23862-201ENSMUST00000180342 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm22128-201ENSMUST00000180346 94 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm29490-201ENSMUST00000190923 342 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Mir7682-201ENSMUST00000198467 58 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm4501-201ENSMUST00000207330 551 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm44871-201ENSMUST00000207821 497 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm4558-201ENSMUST00000207886 521 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm45523-201ENSMUST00000210712 799 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm18644-201ENSMUST00000211458 815 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm3565-201ENSMUST00000222670 609 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm10042-201ENSMUST00000079884 78 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm26064-201ENSMUST00000083381 109 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm23345-201ENSMUST00000083817 150 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm24522-201ENSMUST00000083964 108 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col28a1Q2UY11 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms