Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm5750-201ENSMUST00000218711 801 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm23677-201ENSMUST00000083156 104 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm22293-201ENSMUST00000083314 109 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm23099-201ENSMUST00000083454 139 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a1Q04857 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.32□□□□□ -1.56
Col6a1Q04857 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.32□□□□□ -1.56
Col6a1Q04857 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a1Q04857 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a1Q04857 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col6a1Q04857 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a1Q04857 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col6a1Q04857 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm23481-201ENSMUST00000104173 131 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm11486-201ENSMUST00000107322 478 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm23178-201ENSMUST00000116782 95 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm11313-201ENSMUST00000118779 432 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm9043-201ENSMUST00000119677 314 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm27579-201ENSMUST00000158113 63 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm26430-201ENSMUST00000178054 107 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm27699-201ENSMUST00000183553 180 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm18462-201ENSMUST00000208112 417 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm44648-201ENSMUST00000208267 329 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm9068-201ENSMUST00000217393 455 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm23927-201ENSMUST00000082466 215 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm23464-201ENSMUST00000083145 147 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Rny1-201ENSMUST00000083767 112 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm24031-201ENSMUST00000083930 131 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a1Q04857 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.31□□□□□ -1.56
Col6a1Q04857 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a1Q04857 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a1Q04857 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm24124-201ENSMUST00000104103 132 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm14086-201ENSMUST00000117152 173 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm11813-201ENSMUST00000118586 291 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm14560-201ENSMUST00000118672 375 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm12871-201ENSMUST00000118758 438 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm13973-201ENSMUST00000121371 894 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm23499-201ENSMUST00000157736 268 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm18828-202ENSMUST00000181035 310 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm27688-201ENSMUST00000183634 91 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Mir6363-201ENSMUST00000184880 114 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm37746-201ENSMUST00000193249 198 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm18442-201ENSMUST00000220925 639 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a1Q04857 AV026068-237ENSMUST00000226075 572 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.3□□□□□ -1.56
Col6a1Q04857 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms