Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col8a1Q00780 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col8a1Q00780 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm12255-201ENSMUST00000117184 284 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm11196-201ENSMUST00000119052 395 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm15212-201ENSMUST00000122403 466 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm23779-201ENSMUST00000157938 64 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm22211-201ENSMUST00000158097 156 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm17109-201ENSMUST00000163985 358 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm25748-201ENSMUST00000175487 70 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Snora15-201ENSMUST00000177461 131 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm24618-201ENSMUST00000177718 94 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm23953-201ENSMUST00000178214 94 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm26332-201ENSMUST00000179813 94 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm22863-201ENSMUST00000180265 94 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm27414-201ENSMUST00000185033 381 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm9443-201ENSMUST00000188406 816 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm38053-201ENSMUST00000193938 160 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm8874-201ENSMUST00000196826 286 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm45395-201ENSMUST00000209891 559 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Mecom-201ENSMUST00000061088 348 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Snora52-201ENSMUST00000082732 137 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm25008-201ENSMUST00000083809 81 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col8a1Q00780 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm9577-201ENSMUST00000174655 2620 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.21□□□□□ -1.74
Col8a1Q00780 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col8a1Q00780 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm24715-201ENSMUST00000102377 95 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm12087-201ENSMUST00000121878 258 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm13406-201ENSMUST00000121991 256 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm25846-201ENSMUST00000158013 135 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm7958-201ENSMUST00000178255 468 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm7950-201ENSMUST00000179633 468 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm23523-201ENSMUST00000180190 107 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm37682-201ENSMUST00000191776 522 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm18964-201ENSMUST00000193013 563 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm9442-201ENSMUST00000194242 319 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm9317-201ENSMUST00000197055 862 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm44214-201ENSMUST00000204153 606 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Col8a1Q00780 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.2□□□□□ -1.74
Col8a1Q00780 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm9068-201ENSMUST00000217393 455 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm10088-201ENSMUST00000074116 423 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm25592-201ENSMUST00000082635 131 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm23939-201ENSMUST00000082880 133 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col8a1Q00780 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
Col8a1Q00780 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms