Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.58□□□□□ -2
Nkx3-1P97436 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 Gm25555-201ENSMUST00000158078 111 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.58□□□□□ -2
Nkx3-1P97436 Mir3092-201ENSMUST00000174954 96 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 Gm18747-201ENSMUST00000198129 648 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 Gm19885-201ENSMUST00000212853 343 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Nkx3-1P97436 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.58□□□□□ -2
Nkx3-1P97436 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nkx3-1P97436 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nkx3-1P97436 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Nkx3-1P97436 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Nkx3-1P97436 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.58□□□□□ -2
Nkx3-1P97436 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nkx3-1P97436 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Nkx3-1P97436 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nkx3-1P97436 Gm12782-201ENSMUST00000117519 727 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm11253-201ENSMUST00000118486 201 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm13574-201ENSMUST00000120482 394 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm13009-201ENSMUST00000121307 267 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm12071-201ENSMUST00000121968 469 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.57□□□□□ -2
Nkx3-1P97436 Gm16274-201ENSMUST00000139251 592 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.57□□□□□ -2
Nkx3-1P97436 Gm22885-201ENSMUST00000157410 107 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm22600-201ENSMUST00000157598 269 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm26371-201ENSMUST00000157829 104 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm27163-201ENSMUST00000184767 409 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.57□□□□□ -2
Nkx3-1P97436 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.57□□□□□ -2
Nkx3-1P97436 Gm5649-201ENSMUST00000217918 951 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.57□□□□□ -2
Nkx3-1P97436 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.57□□□□□ -2
Nkx3-1P97436 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Gm25739-201ENSMUST00000082886 107 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.57□□□□□ -2
Nkx3-1P97436 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC2.57□□□□□ -2
Nkx3-1P97436 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nkx3-1P97436 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Nkx3-1P97436 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Nkx3-1P97436 Gm23911-201ENSMUST00000104596 134 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm15530-201ENSMUST00000122206 555 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.56□□□□□ -2
Nkx3-1P97436 Gm22849-201ENSMUST00000157713 307 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm17030-201ENSMUST00000167016 393 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm17166-201ENSMUST00000172006 431 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm15143-201ENSMUST00000178180 714 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm19280-201ENSMUST00000190191 205 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm37431-201ENSMUST00000195102 111 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.56□□□□□ -2
Nkx3-1P97436 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm5175-202ENSMUST00000219699 529 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Gm23738-201ENSMUST00000082828 171 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.56□□□□□ -2
Nkx3-1P97436 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.56□□□□□ -2
Nkx3-1P97436 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Nkx3-1P97436 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx3-1P97436 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx3-1P97436 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
Nkx3-1P97436 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx3-1P97436 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC2.55□□□□□ -2
Nkx3-1P97436 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Gm22141-201ENSMUST00000157403 277 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.55□□□□□ -2
Nkx3-1P97436 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Gm23268-201ENSMUST00000175494 78 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Nkx3-1P97436 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Gm17967-201ENSMUST00000195319 647 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Gm18660-201ENSMUST00000199542 629 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.55□□□□□ -2
Nkx3-1P97436 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Gm43124-201ENSMUST00000201878 278 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Gm43992-201ENSMUST00000204358 197 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Gm18193-201ENSMUST00000210017 772 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
Nkx3-1P97436 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
Nkx3-1P97436 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Diaph3-206ENSMUST00000226745 713 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.55□□□□□ -2
Nkx3-1P97436 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms