Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sox3P53784 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.27□□□□□ -1.89
Sox3P53784 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sox3P53784 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.27□□□□□ -1.89
Sox3P53784 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Sox3P53784 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Sox3P53784 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Sox3P53784 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sox3P53784 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sox3P53784 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sox3P53784 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Sox3P53784 Gm12294-201ENSMUST00000119723 490 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm11387-201ENSMUST00000120266 772 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm15116-201ENSMUST00000122248 663 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm24840-201ENSMUST00000122603 147 ntBASIC3.26□□□□□ -1.89
Sox3P53784 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Sox3P53784 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.26□□□□□ -1.89
Sox3P53784 Gm25373-201ENSMUST00000158156 115 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm22538-201ENSMUST00000158169 299 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm6486-201ENSMUST00000166202 434 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.26□□□□□ -1.89
Sox3P53784 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm23402-201ENSMUST00000178130 107 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm7094-201ENSMUST00000178379 366 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm26365-201ENSMUST00000179177 94 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm38332-201ENSMUST00000194189 147 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.26□□□□□ -1.89
Sox3P53784 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.26□□□□□ -1.89
Sox3P53784 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.26□□□□□ -1.89
Sox3P53784 Gm18410-201ENSMUST00000207199 577 ntBASIC3.26□□□□□ -1.89
Sox3P53784 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sox3P53784 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Sox3P53784 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.26□□□□□ -1.89
Sox3P53784 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.26□□□□□ -1.89
Sox3P53784 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Sox3P53784 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Sox3P53784 Gm25699-201ENSMUST00000082896 167 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm26121-201ENSMUST00000083364 162 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Mir350-201ENSMUST00000083639 99 ntBASIC3.26□□□□□ -1.89
Sox3P53784 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sox3P53784 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sox3P53784 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Sox3P53784 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sox3P53784 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sox3P53784 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.25□□□□□ -1.89
Sox3P53784 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sox3P53784 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Sox3P53784 Gm14607-201ENSMUST00000119119 491 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm11260-201ENSMUST00000121163 942 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm12858-201ENSMUST00000121913 208 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm24936-201ENSMUST00000122598 247 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.25□□□□□ -1.89
Sox3P53784 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.25□□□□□ -1.89
Sox3P53784 Gm23773-201ENSMUST00000158985 296 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.25□□□□□ -1.89
Sox3P53784 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Sox3P53784 Gm37085-201ENSMUST00000193780 196 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm43659-201ENSMUST00000200894 628 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm44256-201ENSMUST00000203304 335 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm44954-201ENSMUST00000208513 227 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sox3P53784 Gm19233-201ENSMUST00000219772 936 ntBASIC3.25□□□□□ -1.89
Sox3P53784 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.25□□□□□ -1.89
Sox3P53784 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.25□□□□□ -1.89
Sox3P53784 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sox3P53784 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Sox3P53784 Gm23615-201ENSMUST00000082602 65 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sox3P53784 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
Sox3P53784 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sox3P53784 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.25□□□□□ -1.89
Sox3P53784 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sox3P53784 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sox3P53784 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sox3P53784 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sox3P53784 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.24□□□□□ -1.89
Sox3P53784 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Sox3P53784 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sox3P53784 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sox3P53784 Gm15108-201ENSMUST00000116160 803 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Mir1195-201ENSMUST00000116818 98 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Gm12568-201ENSMUST00000117362 624 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Gm12495-201ENSMUST00000119750 447 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Gm15111-201ENSMUST00000122142 878 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.24□□□□□ -1.89
Sox3P53784 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sox3P53784 Gm23387-201ENSMUST00000158586 107 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Gm17038-201ENSMUST00000166586 494 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Gm19203-201ENSMUST00000174049 939 ntBASIC3.24□□□□□ -1.89
Sox3P53784 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms