Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm8260-201ENSMUST00000119230 353 ntBASIC3.9□□□□□ -1.79
Cux1P53564 Gm6565-201ENSMUST00000121217 438 ntBASIC3.9□□□□□ -1.79
Cux1P53564 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cux1P53564 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cux1P53564 Gm29356-201ENSMUST00000186935 373 ntBASIC3.9□□□□□ -1.79
Cux1P53564 Gm28594-201ENSMUST00000187022 661 ntBASIC3.9□□□□□ -1.79
Cux1P53564 Gm2427-201ENSMUST00000189121 881 ntBASIC3.9□□□□□ -1.79
Cux1P53564 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cux1P53564 Gm42526-201ENSMUST00000198956 393 ntBASIC3.9□□□□□ -1.79
Cux1P53564 Gm45551-201ENSMUST00000211459 928 ntBASIC3.9□□□□□ -1.79
Cux1P53564 AC132121.1-201ENSMUST00000220774 332 ntBASIC3.9□□□□□ -1.79
Cux1P53564 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cux1P53564 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cux1P53564 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cux1P53564 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.89□□□□□ -1.79
Cux1P53564 Gm24671-201ENSMUST00000104159 158 ntBASIC3.89□□□□□ -1.79
Cux1P53564 Gm14159-201ENSMUST00000119832 451 ntBASIC3.89□□□□□ -1.79
Cux1P53564 Gm11363-201ENSMUST00000121672 548 ntBASIC3.89□□□□□ -1.79
Cux1P53564 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.89□□□□□ -1.79
Cux1P53564 Gm24532-201ENSMUST00000157951 286 ntBASIC3.89□□□□□ -1.79
Cux1P53564 Gm34091-201ENSMUST00000200875 604 ntBASIC3.89□□□□□ -1.79
Cux1P53564 Gm18617-201ENSMUST00000222311 259 ntBASIC3.89□□□□□ -1.79
Cux1P53564 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.89□□□□□ -1.79
Cux1P53564 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cux1P53564 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.89□□□□□ -1.79
Cux1P53564 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.88□□□□□ -1.79
Cux1P53564 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.88□□□□□ -1.79
Cux1P53564 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cux1P53564 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.88□□□□□ -1.79
Cux1P53564 Gm13880-201ENSMUST00000118421 474 ntBASIC3.88□□□□□ -1.79
Cux1P53564 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.88□□□□□ -1.79
Cux1P53564 Gm43922-201ENSMUST00000205071 328 ntBASIC3.88□□□□□ -1.79
Cux1P53564 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.88□□□□□ -1.79
Cux1P53564 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.88□□□□□ -1.79
Cux1P53564 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cux1P53564 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cux1P53564 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cux1P53564 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.87□□□□□ -1.79
Cux1P53564 Gm13862-201ENSMUST00000121220 197 ntBASIC3.87□□□□□ -1.79
Cux1P53564 Gm12956-201ENSMUST00000122184 414 ntBASIC3.87□□□□□ -1.79
Cux1P53564 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.87□□□□□ -1.79
Cux1P53564 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC3.87□□□□□ -1.79
Cux1P53564 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.87□□□□□ -1.79
Cux1P53564 Gm44477-201ENSMUST00000199661 110 ntBASIC3.87□□□□□ -1.79
Cux1P53564 Gm43600-201ENSMUST00000202134 223 ntBASIC3.87□□□□□ -1.79
Cux1P53564 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.87□□□□□ -1.79
Cux1P53564 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.87□□□□□ -1.79
Cux1P53564 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cux1P53564 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cux1P53564 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Cux1P53564 Gm37311-201ENSMUST00000195541 2024 ntBASIC3.86□□□□□ -1.79
Cux1P53564 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Cux1P53564 Gm45710-201ENSMUST00000212847 215 ntBASIC3.86□□□□□ -1.79
Cux1P53564 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.86□□□□□ -1.79
Cux1P53564 Gm25130-201ENSMUST00000082650 156 ntBASIC3.86□□□□□ -1.79
Cux1P53564 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.86□□□□□ -1.79
Cux1P53564 Gm14977-201ENSMUST00000121626 812 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.85□□□□□ -1.79
Cux1P53564 Gm22361-201ENSMUST00000158435 176 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm38283-201ENSMUST00000193041 695 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm38008-201ENSMUST00000195333 518 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm43655-201ENSMUST00000197367 222 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm43415-201ENSMUST00000201934 750 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cux1P53564 Gm23377-201ENSMUST00000082943 126 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.85□□□□□ -1.79
Cux1P53564 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cux1P53564 Mir344e-201ENSMUST00000104677 66 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cux1P53564 Gm26187-201ENSMUST00000157693 101 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm24736-201ENSMUST00000158862 130 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm17194-201ENSMUST00000164610 348 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Trbv10-201ENSMUST00000168322 289 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Snord53-201ENSMUST00000175146 78 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm28064-201ENSMUST00000185639 858 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC3.85□□□□□ -1.79
Cux1P53564 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cux1P53564 Gm38041-201ENSMUST00000194445 661 ntBASIC3.85□□□□□ -1.79
Cux1P53564 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.85□□□□□ -1.79
Cux1P53564 Gm18704-201ENSMUST00000219736 446 ntBASIC3.85□□□□□ -1.79
Cux1P53564 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.85□□□□□ -1.79
Cux1P53564 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cux1P53564 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Cux1P53564 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cux1P53564 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.84□□□□□ -1.79
Cux1P53564 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cux1P53564 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cux1P53564 Gm16533-201ENSMUST00000140035 228 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Gm26277-201ENSMUST00000157097 152 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Gm20561-201ENSMUST00000188131 292 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Gm19498-201ENSMUST00000191128 331 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.84□□□□□ -1.8
Cux1P53564 Gm25820-201ENSMUST00000198589 127 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Gm45252-201ENSMUST00000211579 397 ntBASIC3.84□□□□□ -1.8
Cux1P53564 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.84□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms