Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Nkx2-1P50220 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx2-1P50220 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm26273-201ENSMUST00000104180 131 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm11268-201ENSMUST00000118347 267 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm11693-201ENSMUST00000119625 565 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Mup-ps22-201ENSMUST00000121611 243 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm6900-201ENSMUST00000178971 342 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm43541-201ENSMUST00000197208 581 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm43004-201ENSMUST00000201872 703 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm45063-201ENSMUST00000203726 472 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm5374-201ENSMUST00000222868 657 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.2□□□□□ -1.9
Nkx2-1P50220 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nkx2-1P50220 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm25726-201ENSMUST00000104529 129 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm14125-201ENSMUST00000113442 680 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm8666-201ENSMUST00000117517 292 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm11698-201ENSMUST00000117948 455 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm6797-201ENSMUST00000119440 512 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm11830-201ENSMUST00000120175 561 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm2005-201ENSMUST00000120759 542 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm23905-201ENSMUST00000157568 109 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm24198-201ENSMUST00000157812 108 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm25534-201ENSMUST00000175365 125 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm4761-201ENSMUST00000178086 582 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm14527-201ENSMUST00000179300 639 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm27580-201ENSMUST00000183666 149 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm28594-201ENSMUST00000187022 661 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm18117-201ENSMUST00000187720 742 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm43431-201ENSMUST00000198577 340 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm43884-201ENSMUST00000204251 559 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm24622-201ENSMUST00000082619 162 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Nkx2-1P50220 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.19□□□□□ -1.9
Nkx2-1P50220 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx2-1P50220 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms