Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17929-201ENSMUST00000186851 627 ntBASIC2.65□□□□□ -1.98
HttP42859 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC2.65□□□□□ -1.98
HttP42859 Gm7214-201ENSMUST00000222428 272 ntBASIC2.65□□□□□ -1.98
HttP42859 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HttP42859 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HttP42859 Gm43384-201ENSMUST00000200569 637 ntBASIC2.65□□□□□ -1.99
HttP42859 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.65□□□□□ -1.99
HttP42859 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HttP42859 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HttP42859 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HttP42859 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HttP42859 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
HttP42859 Gm27443-201ENSMUST00000184660 98 ntBASIC2.64□□□□□ -1.99
HttP42859 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.64□□□□□ -1.99
HttP42859 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.64□□□□□ -1.99
HttP42859 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.64□□□□□ -1.99
HttP42859 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HttP42859 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HttP42859 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HttP42859 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HttP42859 Gm24671-201ENSMUST00000104159 158 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC2.64□□□□□ -1.99
HttP42859 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HttP42859 Gm7204-201ENSMUST00000062591 600 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm7117-201ENSMUST00000071515 387 ntBASIC2.64□□□□□ -1.99
HttP42859 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HttP42859 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.64□□□□□ -1.99
HttP42859 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HttP42859 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.64□□□□□ -1.99
HttP42859 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm22988-201ENSMUST00000122759 144 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm22556-201ENSMUST00000157803 100 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm23824-201ENSMUST00000158741 276 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HttP42859 Gm3852-201ENSMUST00000182781 264 ntBASIC2.64□□□□□ -1.99
HttP42859 Gm25699-201ENSMUST00000082896 167 ntBASIC2.64□□□□□ -1.99
HttP42859 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HttP42859 Gm14897-201ENSMUST00000118213 207 ntBASIC2.63□□□□□ -1.99
HttP42859 Gm23043-201ENSMUST00000157890 109 ntBASIC2.63□□□□□ -1.99
HttP42859 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HttP42859 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HttP42859 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.63□□□□□ -1.99
HttP42859 Gm44431-201ENSMUST00000203500 413 ntBASIC2.63□□□□□ -1.99
HttP42859 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.63□□□□□ -1.99
HttP42859 Gm5917-201ENSMUST00000217638 721 ntBASIC2.63□□□□□ -1.99
HttP42859 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.63□□□□□ -1.99
HttP42859 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HttP42859 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HttP42859 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HttP42859 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HttP42859 Gm27786-201ENSMUST00000184337 70 ntBASIC2.63□□□□□ -1.99
HttP42859 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.63□□□□□ -1.99
HttP42859 Snora31-201ENSMUST00000083213 130 ntBASIC2.63□□□□□ -1.99
HttP42859 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
HttP42859 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
HttP42859 Gm14880-201ENSMUST00000117581 292 ntBASIC2.62□□□□□ -1.99
HttP42859 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
HttP42859 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
HttP42859 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.62□□□□□ -1.99
HttP42859 Mir200b-201ENSMUST00000083615 70 ntBASIC2.62□□□□□ -1.99
HttP42859 Gm21033-201ENSMUST00000208590 2608 ntBASIC2.62□□□□□ -1.99
HttP42859 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.62□□□□□ -1.99
HttP42859 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HttP42859 Gm6565-201ENSMUST00000121217 438 ntBASIC2.62□□□□□ -1.99
HttP42859 Gm23885-201ENSMUST00000122682 294 ntBASIC2.62□□□□□ -1.99
HttP42859 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.62□□□□□ -1.99
HttP42859 Gm42666-201ENSMUST00000201954 152 ntBASIC2.62□□□□□ -1.99
HttP42859 Gm44208-201ENSMUST00000205199 421 ntBASIC2.62□□□□□ -1.99
HttP42859 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HttP42859 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HttP42859 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
HttP42859 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HttP42859 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
HttP42859 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.62□□□□□ -1.99
HttP42859 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HttP42859 Gm3489-201ENSMUST00000190083 528 ntBASIC2.62□□□□□ -1.99
HttP42859 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HttP42859 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Gm23942-201ENSMUST00000101956 107 ntBASIC2.61□□□□□ -1.99
HttP42859 Gm26024-201ENSMUST00000158657 322 ntBASIC2.61□□□□□ -1.99
HttP42859 Gm18698-201ENSMUST00000192327 668 ntBASIC2.61□□□□□ -1.99
HttP42859 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
HttP42859 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HttP42859 Gm28920-201ENSMUST00000189957 699 ntBASIC2.61□□□□□ -1.99
HttP42859 Gm37550-201ENSMUST00000193230 463 ntBASIC2.61□□□□□ -1.99
HttP42859 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HttP42859 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
HttP42859 Gm12739-201ENSMUST00000119769 382 ntBASIC2.6□□□□□ -1.99
HttP42859 Gm27315-201ENSMUST00000183977 154 ntBASIC2.6□□□□□ -1.99
HttP42859 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms