Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.19□□□□□ -1.9
Col2a1P28481 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col2a1P28481 Gm43925-201ENSMUST00000203498 206 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm44615-201ENSMUST00000206548 358 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm6842-201ENSMUST00000211361 390 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm45789-201ENSMUST00000213038 364 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.19□□□□□ -1.9
Col2a1P28481 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col2a1P28481 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col2a1P28481 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col2a1P28481 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col2a1P28481 Gm25202-201ENSMUST00000082838 191 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm25739-201ENSMUST00000082886 107 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col2a1P28481 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.19□□□□□ -1.9
Col2a1P28481 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col2a1P28481 Gm22782-201ENSMUST00000104082 132 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 Gm15933-201ENSMUST00000117215 616 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 Gm8569-201ENSMUST00000117630 647 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.18□□□□□ -1.9
Col2a1P28481 Gm24922-201ENSMUST00000158511 102 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col2a1P28481 Gm14527-201ENSMUST00000179300 639 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col2a1P28481 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.18□□□□□ -1.9
Col2a1P28481 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC3.18□□□□□ -1.9
Col2a1P28481 Gm29610-201ENSMUST00000187749 453 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.18□□□□□ -1.9
Col2a1P28481 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col2a1P28481 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col2a1P28481 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col2a1P28481 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col2a1P28481 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col2a1P28481 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.18□□□□□ -1.9
Col2a1P28481 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col2a1P28481 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col2a1P28481 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Col2a1P28481 Mir466i-201ENSMUST00000116924 121 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm11905-201ENSMUST00000117653 678 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm11387-201ENSMUST00000120266 772 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm25808-201ENSMUST00000122784 284 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm12226-201ENSMUST00000144172 876 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm17117-201ENSMUST00000163665 299 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm5277-201ENSMUST00000164923 556 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm24816-201ENSMUST00000175311 151 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Col2a1P28481 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm44208-201ENSMUST00000205199 421 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 AC122295.1-201ENSMUST00000223476 388 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Snora23-201ENSMUST00000082517 184 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm26203-201ENSMUST00000082911 114 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.17□□□□□ -1.9
Col2a1P28481 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.17□□□□□ -1.9
Col2a1P28481 Gm23011-201ENSMUST00000104148 132 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm23803-201ENSMUST00000104610 132 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm25806-201ENSMUST00000122782 122 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm22227-201ENSMUST00000157356 259 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm22361-201ENSMUST00000158435 176 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm25048-201ENSMUST00000158598 91 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm22666-201ENSMUST00000158717 164 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm28574-201ENSMUST00000185757 699 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm28057-201ENSMUST00000186603 615 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm28397-201ENSMUST00000187970 699 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm29366-201ENSMUST00000190481 699 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm37708-201ENSMUST00000192337 895 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.16□□□□□ -1.9
Col2a1P28481 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col2a1P28481 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col2a1P28481 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col2a1P28481 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.16□□□□□ -1.9
Col2a1P28481 Gm13329-201ENSMUST00000117063 265 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms