Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm22034-201ENSMUST00000157283 134 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm27564-201ENSMUST00000185196 96 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Sdc1P18828 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Sdc1P18828 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm18660-201ENSMUST00000199542 629 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm44425-201ENSMUST00000203739 429 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.72□□□□□ -1.97
Sdc1P18828 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Sdc1P18828 Gm22575-201ENSMUST00000082981 110 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Gm23136-201ENSMUST00000083425 99 ntBASIC2.72□□□□□ -1.97
Sdc1P18828 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Sdc1P18828 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Sdc1P18828 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Sdc1P18828 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.71□□□□□ -1.98
Sdc1P18828 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Sdc1P18828 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Sdc1P18828 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm3940-201ENSMUST00000105087 432 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm14971-201ENSMUST00000117980 663 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm11253-201ENSMUST00000118486 201 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm12891-201ENSMUST00000119358 240 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm12252-201ENSMUST00000119517 219 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm16053-201ENSMUST00000120511 188 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm15279-201ENSMUST00000155593 288 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm25603-201ENSMUST00000158361 105 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm19807-201ENSMUST00000173971 667 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm24819-201ENSMUST00000175094 166 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Mir3090-201ENSMUST00000175597 87 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm26988-201ENSMUST00000183296 945 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Mir6411-201ENSMUST00000183556 108 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm37001-201ENSMUST00000193377 190 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm37670-201ENSMUST00000193622 229 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm17780-201ENSMUST00000207142 612 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm20948-201ENSMUST00000211091 449 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm18585-201ENSMUST00000215197 556 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC2.71□□□□□ -1.98
Sdc1P18828 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 AC154626.1-201ENSMUST00000226070 311 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm25792-201ENSMUST00000083289 100 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm25126-201ENSMUST00000083343 102 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Gm4017-201ENSMUST00000084813 338 ntBASIC2.71□□□□□ -1.98
Sdc1P18828 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Sdc1P18828 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
Sdc1P18828 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm25728-201ENSMUST00000104525 159 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm15282-201ENSMUST00000117707 300 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm9850-201ENSMUST00000117916 227 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Snrpert-201ENSMUST00000121967 279 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.7□□□□□ -1.98
Sdc1P18828 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm26148-201ENSMUST00000157430 68 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm22889-201ENSMUST00000158639 58 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm27414-201ENSMUST00000185033 381 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm37878-201ENSMUST00000192108 387 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm43541-201ENSMUST00000197208 581 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm43224-201ENSMUST00000201567 898 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm43979-201ENSMUST00000203179 475 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.7□□□□□ -1.98
Sdc1P18828 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.7□□□□□ -1.98
Sdc1P18828 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.7□□□□□ -1.98
Sdc1P18828 Gm45023-201ENSMUST00000207951 379 ntBASIC2.7□□□□□ -1.98
Sdc1P18828 Gm6012-201ENSMUST00000210821 730 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms