Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.87□□□□□ -1.95
Cdx1P18111 Gm37239-201ENSMUST00000193510 141 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm8023-201ENSMUST00000195298 903 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC2.87□□□□□ -1.95
Cdx1P18111 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Cdx1P18111 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm44223-201ENSMUST00000204854 114 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm44611-201ENSMUST00000207507 355 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm7786-201ENSMUST00000210494 436 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Gm19233-201ENSMUST00000219772 936 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 AL645546.1-201ENSMUST00000225001 189 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Cdx1P18111 Gm4017-201ENSMUST00000084813 338 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Cdx1P18111 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Cdx1P18111 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.87□□□□□ -1.95
Cdx1P18111 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.87□□□□□ -1.95
Cdx1P18111 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Cdx1P18111 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Cdx1P18111 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Cdx1P18111 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Cdx1P18111 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Cdx1P18111 Gm23133-201ENSMUST00000104255 135 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Gm14159-201ENSMUST00000119832 451 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC2.86□□□□□ -1.95
Cdx1P18111 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC2.86□□□□□ -1.95
Cdx1P18111 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.86□□□□□ -1.95
Cdx1P18111 Gm22889-201ENSMUST00000158639 58 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdx1P18111 Spin2g-201ENSMUST00000178425 687 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Gm37576-201ENSMUST00000194228 372 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Gm35876-201ENSMUST00000205044 459 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.86□□□□□ -1.95
Cdx1P18111 Gm18194-201ENSMUST00000210455 481 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 AC154727.1-201ENSMUST00000226537 499 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdx1P18111 Gm23518-201ENSMUST00000082835 153 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Mir370-201ENSMUST00000083499 79 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Gm22864-201ENSMUST00000083950 130 ntBASIC2.86□□□□□ -1.95
Cdx1P18111 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Cdx1P18111 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cdx1P18111 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cdx1P18111 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm25727-201ENSMUST00000104522 131 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm13046-201ENSMUST00000117391 501 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm13268-201ENSMUST00000117485 433 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm12025-201ENSMUST00000117768 144 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm2066-201ENSMUST00000118046 389 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm11356-201ENSMUST00000118974 192 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm2318-201ENSMUST00000119623 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm2005-201ENSMUST00000120759 542 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm22480-201ENSMUST00000122568 128 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm24534-201ENSMUST00000157949 291 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm24773-201ENSMUST00000158513 99 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Cdx1P18111 Mir3070b-201ENSMUST00000175205 89 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7438-201ENSMUST00000177664 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7408-201ENSMUST00000178014 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7386-201ENSMUST00000178020 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm3657-201ENSMUST00000178170 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7415-201ENSMUST00000178205 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7398-201ENSMUST00000178589 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7391-201ENSMUST00000178680 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7375-201ENSMUST00000179232 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm3681-201ENSMUST00000179940 639 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm26746-201ENSMUST00000181722 487 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm27999-201ENSMUST00000183539 193 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm27522-201ENSMUST00000183949 230 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Mir6385-201ENSMUST00000184295 105 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm28069-201ENSMUST00000189926 214 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC2.85□□□□□ -1.95
Cdx1P18111 AC166343.1-201ENSMUST00000213261 577 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cdx1P18111 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm7119-201ENSMUST00000221345 695 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm3829-201ENSMUST00000222362 619 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm5265-201ENSMUST00000076828 342 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Cdx1P18111 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm44527-202ENSMUST00000204519 1314 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.85□□□□□ -1.95
Cdx1P18111 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Cdx1P18111 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms