Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Msx1P13297 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Msx1P13297 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Msx1P13297 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Msx1P13297 Gm650-201ENSMUST00000144428 1551 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Msx1P13297 Mir690-201ENSMUST00000102110 109 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Msx1P13297 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Msx1P13297 Gm12112-201ENSMUST00000117772 231 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Gm13457-201ENSMUST00000117885 267 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Gm15206-201ENSMUST00000119143 454 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Gm20534-201ENSMUST00000172957 172 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Msx1P13297 Gm22355-201ENSMUST00000175531 96 ntBASIC5.39□□□□□ -1.55
Msx1P13297 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.39□□□□□ -1.55
Msx1P13297 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.39□□□□□ -1.55
Msx1P13297 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.39□□□□□ -1.55
Msx1P13297 Gm44108-201ENSMUST00000203525 422 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Msx1P13297 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Msx1P13297 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Msx1P13297 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Snord82-201ENSMUST00000082889 70 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.39□□□□□ -1.55
Msx1P13297 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Msx1P13297 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Msx1P13297 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Msx1P13297 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Msx1P13297 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 Gm11822-201ENSMUST00000119177 415 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm11506-201ENSMUST00000122414 470 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.38□□□□□ -1.55
Msx1P13297 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 Gm25599-201ENSMUST00000157816 103 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm23279-201ENSMUST00000157912 97 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm26172-201ENSMUST00000158421 134 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm21999-201ENSMUST00000165985 387 ntBASIC5.38□□□□□ -1.55
Msx1P13297 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.38□□□□□ -1.55
Msx1P13297 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 Gm19206-201ENSMUST00000186401 827 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.38□□□□□ -1.55
Msx1P13297 Gm45513-201ENSMUST00000210228 376 ntBASIC5.38□□□□□ -1.55
Msx1P13297 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.38□□□□□ -1.55
Msx1P13297 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Msx1P13297 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.38□□□□□ -1.55
Msx1P13297 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.38□□□□□ -1.55
Msx1P13297 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Msx1P13297 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Msx1P13297 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Msx1P13297 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.37□□□□□ -1.55
Msx1P13297 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Msx1P13297 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Msx1P13297 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
Msx1P13297 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Msx1P13297 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Msx1P13297 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Msx1P13297 Mir687-201ENSMUST00000102166 89 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Mir92b-201ENSMUST00000102300 83 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm25938-201ENSMUST00000104139 166 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm23750-201ENSMUST00000104222 132 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm15426-201ENSMUST00000117823 556 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm15896-201ENSMUST00000118045 440 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm14037-201ENSMUST00000120576 313 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.37□□□□□ -1.55
Msx1P13297 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.37□□□□□ -1.55
Msx1P13297 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.37□□□□□ -1.55
Msx1P13297 Gm26312-201ENSMUST00000157769 165 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm23318-201ENSMUST00000158000 108 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm22989-201ENSMUST00000158313 86 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm16303-201ENSMUST00000161498 390 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm23355-201ENSMUST00000177614 107 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm23148-201ENSMUST00000180367 107 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.37□□□□□ -1.55
Msx1P13297 Gm29484-201ENSMUST00000186067 324 ntBASIC5.37□□□□□ -1.55
Msx1P13297 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.37□□□□□ -1.55
Msx1P13297 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Msx1P13297 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC5.37□□□□□ -1.55
Msx1P13297 Gm40692-201ENSMUST00000220411 491 ntBASIC5.37□□□□□ -1.55
Msx1P13297 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms