Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lire1P11260 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Lire1P11260 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Lire1P11260 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lire1P11260 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lire1P11260 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lire1P11260 Gm24403-201ENSMUST00000104616 130 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm14299-201ENSMUST00000117586 397 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm2066-201ENSMUST00000118046 389 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm13541-201ENSMUST00000119519 283 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm6071-201ENSMUST00000119561 440 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm2318-201ENSMUST00000119623 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm14159-201ENSMUST00000119832 451 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm2005-201ENSMUST00000120759 542 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm13692-201ENSMUST00000120774 371 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm16274-201ENSMUST00000139251 592 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm22059-201ENSMUST00000157544 104 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm22339-201ENSMUST00000157718 62 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.66□□□□□ -1.82
Lire1P11260 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lire1P11260 Gm7438-201ENSMUST00000177664 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm7408-201ENSMUST00000178014 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm7386-201ENSMUST00000178020 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm3657-201ENSMUST00000178170 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm7415-201ENSMUST00000178205 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm7398-201ENSMUST00000178589 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm7391-201ENSMUST00000178680 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lire1P11260 Gm7375-201ENSMUST00000179232 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm3681-201ENSMUST00000179940 639 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Mir6411-201ENSMUST00000183556 108 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Gm19774-201ENSMUST00000190667 114 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm7142-201ENSMUST00000194232 586 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm43649-201ENSMUST00000196596 391 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm44520-201ENSMUST00000205447 802 ntBASIC3.66□□□□□ -1.82
Lire1P11260 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.66□□□□□ -1.82
Lire1P11260 Gm4052-201ENSMUST00000220890 451 ntBASIC3.66□□□□□ -1.82
Lire1P11260 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.66□□□□□ -1.82
Lire1P11260 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lire1P11260 Mir323-201ENSMUST00000083683 86 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm23102-201ENSMUST00000083724 116 ntBASIC3.66□□□□□ -1.82
Lire1P11260 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Lire1P11260 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.66□□□□□ -1.82
Lire1P11260 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lire1P11260 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Lire1P11260 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.65□□□□□ -1.82
Lire1P11260 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Lire1P11260 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Lire1P11260 Gm26019-201ENSMUST00000104407 119 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm23226-201ENSMUST00000116927 103 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm14282-201ENSMUST00000119484 240 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Lire1P11260 Gm5937-201ENSMUST00000119715 643 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm12335-201ENSMUST00000119738 327 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm12213-201ENSMUST00000119924 353 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm4916-201ENSMUST00000126139 642 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm10075-201ENSMUST00000162030 545 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
Lire1P11260 Gm5527-201ENSMUST00000179821 642 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lire1P11260 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.65□□□□□ -1.83
Lire1P11260 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Lire1P11260 Gm18429-201ENSMUST00000198707 421 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Lire1P11260 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.65□□□□□ -1.83
Lire1P11260 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.65□□□□□ -1.83
Lire1P11260 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.65□□□□□ -1.83
Lire1P11260 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lire1P11260 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Lire1P11260 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.65□□□□□ -1.83
Lire1P11260 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Lire1P11260 Gm13614-201ENSMUST00000117306 503 ntBASIC3.64□□□□□ -1.83
Lire1P11260 Gm14570-201ENSMUST00000119444 391 ntBASIC3.64□□□□□ -1.83
Lire1P11260 Gm8840-201ENSMUST00000122454 386 ntBASIC3.64□□□□□ -1.83
Lire1P11260 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.64□□□□□ -1.83
Lire1P11260 Gm15733-201ENSMUST00000132957 242 ntBASIC3.64□□□□□ -1.83
Lire1P11260 Gm22135-201ENSMUST00000158752 108 ntBASIC3.64□□□□□ -1.83
Lire1P11260 Gm7241-201ENSMUST00000159853 357 ntBASIC3.64□□□□□ -1.83
Lire1P11260 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Lire1P11260 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Lire1P11260 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.64□□□□□ -1.83
Lire1P11260 Gm4207-201ENSMUST00000173144 960 ntBASIC3.64□□□□□ -1.83
Lire1P11260 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Lire1P11260 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms