Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col5a1O88207 Gm24273-201ENSMUST00000102332 164 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm9078-201ENSMUST00000119126 617 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm7421-201ENSMUST00000119298 639 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm13751-201ENSMUST00000120280 752 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm7365-201ENSMUST00000120877 639 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC2.59□□□□□ -1.99
Col5a1O88207 Gm23897-201ENSMUST00000158110 158 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm29556-201ENSMUST00000187591 696 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm43925-201ENSMUST00000203498 206 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm44554-201ENSMUST00000208738 147 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
Col5a1O88207 Gm18043-201ENSMUST00000216741 739 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm8274-201ENSMUST00000219820 463 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.59□□□□□ -1.99
Col5a1O88207 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col5a1O88207 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col5a1O88207 Gm23847-201ENSMUST00000083829 110 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col5a1O88207 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col5a1O88207 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Gm43369-201ENSMUST00000196373 1552 ntBASIC2.59□□□□□ -1.99
Col5a1O88207 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col5a1O88207 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC2.59□□□□□ -1.99
Col5a1O88207 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Col5a1O88207 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
Col5a1O88207 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.59□□□□□ -2
Col5a1O88207 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Col5a1O88207 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
Col5a1O88207 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col5a1O88207 Gm23551-201ENSMUST00000116852 121 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm14402-201ENSMUST00000122217 508 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm7582-201ENSMUST00000160831 603 ntBASIC2.58□□□□□ -2
Col5a1O88207 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC2.58□□□□□ -2
Col5a1O88207 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC2.58□□□□□ -2
Col5a1O88207 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm19427-201ENSMUST00000183619 208 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm28574-201ENSMUST00000185757 699 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm28596-201ENSMUST00000185870 696 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm28057-201ENSMUST00000186603 615 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm28397-201ENSMUST00000187970 699 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm29366-201ENSMUST00000190481 699 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Gm32295-201ENSMUST00000192558 696 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col5a1O88207 Gm31260-201ENSMUST00000193478 696 ntBASIC2.58□□□□□ -2
Col5a1O88207 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col5a1O88207 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.58□□□□□ -2
Col5a1O88207 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col5a1O88207 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Gm21033-201ENSMUST00000208590 2608 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm13771-201ENSMUST00000117988 238 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.58□□□□□ -2
Col5a1O88207 Gm8649-201ENSMUST00000181799 233 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Mir6374-201ENSMUST00000184003 107 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm27369-201ENSMUST00000185182 71 ntBASIC2.58□□□□□ -2
Col5a1O88207 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col5a1O88207 Gm28060-201ENSMUST00000191554 189 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm38311-201ENSMUST00000192945 165 ntBASIC2.58□□□□□ -2
Col5a1O88207 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm44585-201ENSMUST00000207150 607 ntBASIC2.58□□□□□ -2
Col5a1O88207 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC2.58□□□□□ -2
Col5a1O88207 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.58□□□□□ -2
Col5a1O88207 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col5a1O88207 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col5a1O88207 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col5a1O88207 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col5a1O88207 Snord21-201ENSMUST00000082519 94 ntBASIC2.58□□□□□ -2
Col5a1O88207 Gm26072-201ENSMUST00000083135 107 ntBASIC2.58□□□□□ -2
Col5a1O88207 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col5a1O88207 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.58□□□□□ -2
Col5a1O88207 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col5a1O88207 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Col5a1O88207 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Col5a1O88207 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Col5a1O88207 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm24120-201ENSMUST00000103978 129 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.57□□□□□ -2
Col5a1O88207 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.57□□□□□ -2
Col5a1O88207 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.57□□□□□ -2
Col5a1O88207 Gm25113-201ENSMUST00000157185 143 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm17091-201ENSMUST00000163248 357 ntBASIC2.57□□□□□ -2
Col5a1O88207 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC2.57□□□□□ -2
Col5a1O88207 Mir7013-201ENSMUST00000183540 72 ntBASIC2.57□□□□□ -2
Col5a1O88207 Mir7226-201ENSMUST00000184953 60 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm29525-201ENSMUST00000189844 699 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm29523-201ENSMUST00000191415 699 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.57□□□□□ -2
Col5a1O88207 Gm38018-201ENSMUST00000195651 540 ntBASIC2.57□□□□□ -2
Col5a1O88207 Gm10297-201ENSMUST00000207136 651 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms