Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11797-201ENSMUST00000121336 754 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm26100-201ENSMUST00000157245 127 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm25572-201ENSMUST00000157527 172 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm22651-201ENSMUST00000157872 94 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm22726-201ENSMUST00000158089 179 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm25432-201ENSMUST00000158284 66 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm23409-201ENSMUST00000158516 237 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm26362-201ENSMUST00000158865 315 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm16285-201ENSMUST00000162999 347 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm7438-201ENSMUST00000177664 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm7408-201ENSMUST00000178014 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm7386-201ENSMUST00000178020 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm3657-201ENSMUST00000178170 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm7415-201ENSMUST00000178205 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm7398-201ENSMUST00000178589 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm7391-201ENSMUST00000178680 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm7375-201ENSMUST00000179232 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm3681-201ENSMUST00000179940 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm6113-201ENSMUST00000180319 639 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Mir7074-201ENSMUST00000183884 63 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Mir8103-201ENSMUST00000183945 107 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm43214-201ENSMUST00000199242 352 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm31532-201ENSMUST00000203555 767 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm6112-201ENSMUST00000208037 629 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Hmgb3O54879 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Hmgb3O54879 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Hmgb3O54879 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Hmgb3O54879 Gm24533-201ENSMUST00000083138 196 ntBASIC2.34□□□□□ -2.03
Hmgb3O54879 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Hmgb3O54879 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.34□□□□□ -2.04
Hmgb3O54879 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Hmgb3O54879 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Hmgb3O54879 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Hmgb3O54879 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm14448-201ENSMUST00000116383 210 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm14880-201ENSMUST00000117581 292 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm14008-201ENSMUST00000120483 274 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm14623-201ENSMUST00000121398 603 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Hmgb3O54879 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm24876-201ENSMUST00000158780 92 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm3104-201ENSMUST00000171004 473 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Hmgb3O54879 Snord53-201ENSMUST00000175146 78 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm28847-201ENSMUST00000186778 700 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm29365-201ENSMUST00000189461 699 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm28069-201ENSMUST00000189926 214 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm17966-201ENSMUST00000193453 594 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm36943-201ENSMUST00000194422 282 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm44348-201ENSMUST00000200165 122 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm34272-201ENSMUST00000208886 253 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm18346-201ENSMUST00000216782 325 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm7422-201ENSMUST00000220115 640 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.33□□□□□ -2.04
Hmgb3O54879 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Mir132-201ENSMUST00000083603 66 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Mir101b-201ENSMUST00000083622 97 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.33□□□□□ -2.04
Hmgb3O54879 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Hmgb3O54879 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm23948-201ENSMUST00000104030 132 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm13349-201ENSMUST00000118436 411 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm11693-201ENSMUST00000119625 565 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm11819-201ENSMUST00000122192 372 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm13487-201ENSMUST00000122240 864 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm26020-201ENSMUST00000122729 183 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm5958-201ENSMUST00000147698 297 ntBASIC2.32□□□□□ -2.04
Hmgb3O54879 Gm23325-201ENSMUST00000157422 129 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms