Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc4O35988 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Sdc4O35988 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.85□□□□□ -1.95
Sdc4O35988 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Sdc4O35988 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Sdc4O35988 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Sdc4O35988 Gm22970-201ENSMUST00000083304 186 ntBASIC2.85□□□□□ -1.95
Sdc4O35988 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Sdc4O35988 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc4O35988 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Sdc4O35988 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Sdc4O35988 Gm14448-201ENSMUST00000116383 210 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm24291-201ENSMUST00000157633 162 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm25669-201ENSMUST00000157699 112 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Mir5098-201ENSMUST00000175320 82 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm8649-201ENSMUST00000181799 233 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.84□□□□□ -1.95
Sdc4O35988 Gm27163-201ENSMUST00000184767 409 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm28390-201ENSMUST00000185212 700 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.84□□□□□ -1.95
Sdc4O35988 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.84□□□□□ -1.95
Sdc4O35988 Gm8242-202ENSMUST00000193056 475 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm38076-201ENSMUST00000193889 450 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm32447-201ENSMUST00000194265 697 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.84□□□□□ -1.95
Sdc4O35988 Gm43384-201ENSMUST00000200569 637 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC2.84□□□□□ -1.95
Sdc4O35988 Gm7530-201ENSMUST00000218466 605 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Gm2436-201ENSMUST00000219562 774 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.84□□□□□ -1.95
Sdc4O35988 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Sdc4O35988 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Sdc4O35988 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.84□□□□□ -1.96
Sdc4O35988 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Sdc4O35988 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
Sdc4O35988 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Sdc4O35988 Gm24068-201ENSMUST00000104513 132 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 Gm11433-201ENSMUST00000118318 228 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc4O35988 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.83□□□□□ -1.96
Sdc4O35988 Gm26277-201ENSMUST00000157097 152 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 Gm16111-201ENSMUST00000162128 285 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 Gm19620-201ENSMUST00000195972 434 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 Gm44425-201ENSMUST00000203739 429 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC2.83□□□□□ -1.96
Sdc4O35988 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.83□□□□□ -1.96
Sdc4O35988 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Sdc4O35988 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Sdc4O35988 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Sdc4O35988 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Sdc4O35988 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc4O35988 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc4O35988 Mir1195-201ENSMUST00000116818 98 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Gm11404-201ENSMUST00000120872 494 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.82□□□□□ -1.96
Sdc4O35988 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc4O35988 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc4O35988 Gm27786-201ENSMUST00000184337 70 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Mir7062-201ENSMUST00000185038 66 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.82□□□□□ -1.96
Sdc4O35988 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Gm18660-201ENSMUST00000199542 629 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Gm18193-201ENSMUST00000210017 772 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Sdc4O35988 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc4O35988 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc4O35988 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Sdc4O35988 Olfr895-201ENSMUST00000093864 951 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc4O35988 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.82□□□□□ -1.96
Sdc4O35988 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.82□□□□□ -1.96
Sdc4O35988 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Sdc4O35988 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.81□□□□□ -1.96
Sdc4O35988 Snord14c-201ENSMUST00000101927 86 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Gm15421-202ENSMUST00000118224 399 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Gm15951-201ENSMUST00000118377 400 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Gm13574-201ENSMUST00000120482 394 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Gm8880-201ENSMUST00000121800 454 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.81□□□□□ -1.96
Sdc4O35988 Gm22330-201ENSMUST00000158068 115 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Mir7013-201ENSMUST00000183540 72 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Mir6917-201ENSMUST00000184111 61 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Sdc4O35988 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.81□□□□□ -1.96
Sdc4O35988 Gm36638-201ENSMUST00000193295 400 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.81□□□□□ -1.96
Sdc4O35988 Gm7422-201ENSMUST00000220115 640 ntBASIC2.81□□□□□ -1.96
Sdc4O35988 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms