Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.62□□□□□ -1.67
Nedd9O35177 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nedd9O35177 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Nedd9O35177 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nedd9O35177 Synpr-207ENSMUST00000223583 3362 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nedd9O35177 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm24273-201ENSMUST00000102332 164 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Nedd9O35177 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Nedd9O35177 Gm23273-201ENSMUST00000104058 135 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm14037-201ENSMUST00000120576 313 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm5963-201ENSMUST00000143451 236 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm25970-201ENSMUST00000157165 86 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm24636-201ENSMUST00000158673 288 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm5258-201ENSMUST00000165437 327 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Nedd9O35177 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.61□□□□□ -1.67
Nedd9O35177 Gm17811-201ENSMUST00000206193 387 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.61□□□□□ -1.67
Nedd9O35177 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Nedd9O35177 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Nedd9O35177 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Nedd9O35177 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Nedd9O35177 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Nedd9O35177 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Nedd9O35177 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Nedd9O35177 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.61□□□□□ -1.67
Nedd9O35177 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.6□□□□□ -1.67
Nedd9O35177 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Nedd9O35177 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Nedd9O35177 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Nedd9O35177 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nedd9O35177 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm22758-201ENSMUST00000102275 96 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm15175-201ENSMUST00000117629 132 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm13804-201ENSMUST00000119552 172 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm14500-201ENSMUST00000121647 113 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm23206-201ENSMUST00000122720 184 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm4487-201ENSMUST00000150617 442 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm25909-201ENSMUST00000157619 121 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm24853-201ENSMUST00000158026 121 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm25555-201ENSMUST00000158078 111 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm23024-201ENSMUST00000158770 292 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm24224-201ENSMUST00000158828 258 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Nedd9O35177 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm17538-201ENSMUST00000168236 327 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm22631-201ENSMUST00000179656 94 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.6□□□□□ -1.67
Nedd9O35177 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm29045-201ENSMUST00000187278 698 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm42475-201ENSMUST00000201212 295 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm43975-201ENSMUST00000203023 481 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm44054-201ENSMUST00000203814 372 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm45232-201ENSMUST00000207811 162 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nedd9O35177 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.6□□□□□ -1.67
Nedd9O35177 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm9616-201ENSMUST00000221154 781 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.6□□□□□ -1.67
Nedd9O35177 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm23093-201ENSMUST00000083450 102 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Nedd9O35177 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nedd9O35177 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Nedd9O35177 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Nedd9O35177 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.6□□□□□ -1.67
Nedd9O35177 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.59□□□□□ -1.67
Nedd9O35177 Gm7363-201ENSMUST00000119883 399 ntBASIC4.59□□□□□ -1.67
Nedd9O35177 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Nedd9O35177 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.59□□□□□ -1.67
Nedd9O35177 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms