Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm27773-201ENSMUST00000184087 78 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm28314-201ENSMUST00000191276 345 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm37085-201ENSMUST00000193780 196 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm5373-201ENSMUST00000212113 1050 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm18346-201ENSMUST00000216782 325 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 AC167721.1-201ENSMUST00000217088 279 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm18507-201ENSMUST00000218855 525 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Olfr815-201ENSMUST00000071557 951 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm26129-201ENSMUST00000082719 107 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm24147-201ENSMUST00000082763 144 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm8074-201ENSMUST00000095071 252 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Gm44625-201ENSMUST00000207838 1561 ntBASIC1.89□□□□□ -2.11
Trav8-1A0A075B641 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm12448-201ENSMUST00000118852 655 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm14159-201ENSMUST00000119832 451 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm16445-201ENSMUST00000120399 714 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Defa-ps5-201ENSMUST00000121541 279 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm16331-201ENSMUST00000144274 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm25341-201ENSMUST00000157461 268 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm22516-201ENSMUST00000158266 124 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Mir3104-201ENSMUST00000174911 63 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21842-201ENSMUST00000177552 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21626-201ENSMUST00000177791 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21562-201ENSMUST00000177888 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21539-201ENSMUST00000177925 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17522-201ENSMUST00000178144 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21599-201ENSMUST00000178249 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21914-201ENSMUST00000178452 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21723-201ENSMUST00000178692 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21916-201ENSMUST00000178771 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21801-201ENSMUST00000178865 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21633-201ENSMUST00000178941 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17412-201ENSMUST00000179261 468 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21821-201ENSMUST00000179646 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21588-201ENSMUST00000180074 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21780-201ENSMUST00000180128 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21572-201ENSMUST00000180134 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm21529-201ENSMUST00000180175 498 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm27155-201ENSMUST00000183716 898 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm29370-202ENSMUST00000187476 499 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm28744-201ENSMUST00000189939 340 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm7142-201ENSMUST00000194232 586 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm36997-201ENSMUST00000195090 707 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm43722-201ENSMUST00000196054 124 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Mir7232-201ENSMUST00000197929 74 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm43478-201ENSMUST00000200381 292 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 AC161054.1-201ENSMUST00000214319 184 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Diaph3-206ENSMUST00000226745 713 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Gm5185-201ENSMUST00000080271 619 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Mir423-201ENSMUST00000083584 109 ntBASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Trav8-1A0A075B641 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Gm6207-201ENSMUST00000120075 1386 ntBASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Gm6228-201ENSMUST00000178856 1386 ntBASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Gm11576-201ENSMUST00000117433 417 ntBASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Gm6274-201ENSMUST00000118173 797 ntBASIC1.87□□□□□ -2.11
Trav8-1A0A075B641 Gm11483-201ENSMUST00000119839 247 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms