Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm30280-201ENSMUST00000192214 262 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm18252-203ENSMUST00000215855 757 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm18016-201ENSMUST00000216119 801 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm17829-201ENSMUST00000219782 344 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm8785-201ENSMUST00000220259 487 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
H2afb1S4R1E0 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm26002-201ENSMUST00000101915 107 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm23481-201ENSMUST00000104173 131 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm14899-201ENSMUST00000118673 548 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm12252-201ENSMUST00000119517 219 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm15480-201ENSMUST00000120442 519 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm11692-201ENSMUST00000122121 902 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm22107-201ENSMUST00000122548 100 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm25436-201ENSMUST00000158275 145 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm24503-201ENSMUST00000158454 135 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm43384-201ENSMUST00000200569 637 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm42758-201ENSMUST00000202146 283 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm18691-201ENSMUST00000203593 872 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm45727-201ENSMUST00000212886 572 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm42942-201ENSMUST00000196086 1328 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.35□□□□□ -1.87
H2afb1S4R1E0 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm16431-201ENSMUST00000117454 431 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm7429-201ENSMUST00000118664 348 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm12495-201ENSMUST00000119750 447 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm6591-201ENSMUST00000121063 434 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm23183-201ENSMUST00000122595 323 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm25052-201ENSMUST00000122661 158 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm22890-201ENSMUST00000158642 144 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm17117-201ENSMUST00000163665 299 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm27233-201ENSMUST00000184030 307 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm28437-201ENSMUST00000190277 783 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm19620-201ENSMUST00000195972 434 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm43070-201ENSMUST00000196938 415 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm5548-201ENSMUST00000055878 397 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm25481-201ENSMUST00000083221 158 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
H2afb1S4R1E0 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
H2afb1S4R1E0 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
H2afb1S4R1E0 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.34□□□□□ -1.88
H2afb1S4R1E0 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
H2afb1S4R1E0 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.33□□□□□ -1.88
H2afb1S4R1E0 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
H2afb1S4R1E0 Mir551b-201ENSMUST00000102165 98 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms