Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf40aQ9R1C7 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Prpf40aQ9R1C7 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Prpf40aQ9R1C7 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Prpf40aQ9R1C7 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Prpf40aQ9R1C7 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.72□□□□□ -1.49
Prpf40aQ9R1C7 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Prpf40aQ9R1C7 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Prpf40aQ9R1C7 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm26067-201ENSMUST00000103789 110 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm24230-201ENSMUST00000104313 129 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm12650-201ENSMUST00000121966 258 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm23964-201ENSMUST00000157966 107 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm23354-201ENSMUST00000158426 104 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Snora15-201ENSMUST00000177461 131 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm23864-201ENSMUST00000177607 107 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm18177-201ENSMUST00000188373 404 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28429-201ENSMUST00000188521 363 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28467-201ENSMUST00000190981 318 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm37882-201ENSMUST00000195254 196 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm7407-201ENSMUST00000208301 568 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Snord59a-201ENSMUST00000082844 74 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm26055-201ENSMUST00000083038 107 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Gm25139-201ENSMUST00000083247 210 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Mir449a-201ENSMUST00000083641 91 ntBASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Prpf40aQ9R1C7 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms