Protein–RNA interactions for Protein: Q9QUK3

Cln8, Protein CLN8, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8Q9QUK3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm43493-201ENSMUST00000199837 202 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm43659-201ENSMUST00000200894 628 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm43979-201ENSMUST00000203179 475 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm14681-201ENSMUST00000118047 411 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm14687-201ENSMUST00000120206 363 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm14591-201ENSMUST00000120407 518 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm22380-201ENSMUST00000157479 95 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm16236-201ENSMUST00000159588 379 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm22910-201ENSMUST00000178568 132 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm5527-201ENSMUST00000179821 642 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm18505-201ENSMUST00000187360 790 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm28785-201ENSMUST00000187478 379 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm38280-201ENSMUST00000192610 158 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm43239-201ENSMUST00000200131 201 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm39147-201ENSMUST00000211376 465 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm45551-201ENSMUST00000211459 928 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm6369-201ENSMUST00000069626 412 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm23925-201ENSMUST00000082471 132 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Mir101b-201ENSMUST00000083622 97 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm10161-201ENSMUST00000091506 204 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.03□□□□□ -1.92
Cln8Q9QUK3 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Cln8Q9QUK3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Cln8Q9QUK3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
Cln8Q9QUK3 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm2348-201ENSMUST00000108782 300 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm12782-201ENSMUST00000117519 727 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm14581-201ENSMUST00000121726 198 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm14162-201ENSMUST00000121985 601 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm14713-201ENSMUST00000122362 686 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm25295-201ENSMUST00000122794 306 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm3123-201ENSMUST00000163480 480 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm6113-201ENSMUST00000180319 639 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Mir6393-201ENSMUST00000183709 94 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm29064-201ENSMUST00000187014 813 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm29460-201ENSMUST00000188607 714 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm28466-201ENSMUST00000190678 659 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm6510-201ENSMUST00000195916 574 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm5552-201ENSMUST00000197149 515 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm19418-201ENSMUST00000197436 580 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm45312-201ENSMUST00000210566 311 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cln8Q9QUK3 Gm9309-201ENSMUST00000223537 546 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.02□□□□□ -1.93
Cln8Q9QUK3 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms