Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cpsf1Q9EPU4 Gm3940-201ENSMUST00000105087 432 ntBASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Gm38311-201ENSMUST00000192945 165 ntBASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Gm37533-201ENSMUST00000193848 545 ntBASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cpsf1Q9EPU4 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Snord53-201ENSMUST00000175146 78 ntBASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cpsf1Q9EPU4 Gm13743-201ENSMUST00000121486 724 ntBASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Gm13419-201ENSMUST00000121711 271 ntBASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Gm25866-201ENSMUST00000158245 112 ntBASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Gm650-201ENSMUST00000144428 1551 ntBASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cpsf1Q9EPU4 Gm19257-201ENSMUST00000186121 183 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm20074-201ENSMUST00000208144 484 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Snord14c-201ENSMUST00000101927 86 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm11866-201ENSMUST00000120209 335 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm15244-201ENSMUST00000121122 130 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm4468-201ENSMUST00000170206 294 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm27580-201ENSMUST00000183666 149 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm29356-201ENSMUST00000186935 373 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm43704-201ENSMUST00000196164 496 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Gm20946-201ENSMUST00000212367 461 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Olfr203-201ENSMUST00000089305 924 ntBASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cpsf1Q9EPU4 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm24670-201ENSMUST00000104154 132 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm12598-201ENSMUST00000117333 830 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm9850-201ENSMUST00000117916 227 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm6574-201ENSMUST00000120037 362 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm16533-201ENSMUST00000140035 228 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Mir3106-201ENSMUST00000175401 82 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm27330-201ENSMUST00000184689 132 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm18557-201ENSMUST00000218710 433 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Gm22304-201ENSMUST00000082688 129 ntBASIC3.6□□□□□ -1.83
Cpsf1Q9EPU4 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Cpsf1Q9EPU4 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 Gm28637-201ENSMUST00000179424 345 ntBASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Cpsf1Q9EPU4 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cpsf1Q9EPU4 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cpsf1Q9EPU4 Gm11943-201ENSMUST00000119473 327 ntBASIC3.58□□□□□ -1.84
Cpsf1Q9EPU4 Gm11876-201ENSMUST00000120002 269 ntBASIC3.58□□□□□ -1.84
Cpsf1Q9EPU4 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms