Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.33□□□□□ -1.56
Upf1Q9EPU0 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Upf1Q9EPU0 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.33□□□□□ -1.56
Upf1Q9EPU0 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Upf1Q9EPU0 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Upf1Q9EPU0 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Upf1Q9EPU0 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm24281-201ENSMUST00000104234 136 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm12568-201ENSMUST00000117362 624 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm11784-201ENSMUST00000118568 474 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm14560-201ENSMUST00000118672 375 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm14303-201ENSMUST00000121320 171 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm26350-201ENSMUST00000157531 288 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm27165-201ENSMUST00000183951 232 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm45344-201ENSMUST00000211610 341 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm18903-201ENSMUST00000215343 480 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 AC115289.1-201ENSMUST00000224915 522 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf1Q9EPU0 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm11386-201ENSMUST00000117761 347 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm11813-201ENSMUST00000118586 291 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm15112-201ENSMUST00000120152 860 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm14736-201ENSMUST00000121470 336 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm22136-201ENSMUST00000158751 268 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm25156-201ENSMUST00000179809 79 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Mir6363-201ENSMUST00000184880 114 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm28781-201ENSMUST00000185760 696 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm29307-201ENSMUST00000187367 696 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm19641-201ENSMUST00000188432 417 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm29339-201ENSMUST00000189613 696 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm29407-201ENSMUST00000191468 696 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm38019-201ENSMUST00000195133 380 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm43976-201ENSMUST00000203637 235 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm44687-201ENSMUST00000204975 235 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm6303-201ENSMUST00000210123 471 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.31□□□□□ -1.56
Upf1Q9EPU0 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Upf1Q9EPU0 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm25781-201ENSMUST00000122527 84 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm6510-201ENSMUST00000195916 574 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms