Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm24713-201ENSMUST00000178850 107 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm25448-201ENSMUST00000180065 107 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm28399-201ENSMUST00000186221 318 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm8600-201ENSMUST00000186320 905 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm28572-201ENSMUST00000187444 318 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm29350-201ENSMUST00000189141 541 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm29365-201ENSMUST00000189461 699 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm29475-201ENSMUST00000190767 312 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm36934-201ENSMUST00000192007 306 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm18468-201ENSMUST00000207321 369 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm18470-201ENSMUST00000207467 420 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm18465-201ENSMUST00000207468 369 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm18464-201ENSMUST00000207803 420 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm18458-201ENSMUST00000207908 369 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm18461-201ENSMUST00000208421 420 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm7040-201ENSMUST00000223271 443 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ssu72Q9CY97 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm13250-201ENSMUST00000117209 753 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm15844-201ENSMUST00000118016 576 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm11813-201ENSMUST00000118586 291 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm14013-201ENSMUST00000119006 270 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm12087-201ENSMUST00000121878 258 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm16358-201ENSMUST00000146046 210 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm26354-201ENSMUST00000158221 129 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm17153-201ENSMUST00000171314 490 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm4761-201ENSMUST00000178086 582 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm22448-201ENSMUST00000179254 107 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm27233-201ENSMUST00000184030 307 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm37682-201ENSMUST00000191776 522 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm10292-202ENSMUST00000193165 585 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm28724-202ENSMUST00000194218 295 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm9480-201ENSMUST00000198038 616 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm45498-201ENSMUST00000210346 283 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm9269-201ENSMUST00000221661 578 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm5670-201ENSMUST00000093546 372 ntBASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ssu72Q9CY97 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Gm22831-201ENSMUST00000102473 109 ntBASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Mir1900-201ENSMUST00000122714 78 ntBASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC4.74□□□□□ -1.65
Ssu72Q9CY97 Gm22725-201ENSMUST00000158092 110 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms