Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.87□□□□□ -1.79
Ccdc43Q9CR29 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc43Q9CR29 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.87□□□□□ -1.79
Ccdc43Q9CR29 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc43Q9CR29 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.87□□□□□ -1.79
Ccdc43Q9CR29 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.87□□□□□ -1.79
Ccdc43Q9CR29 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc43Q9CR29 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm6913-201ENSMUST00000100019 348 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm12803-201ENSMUST00000118907 821 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm15157-201ENSMUST00000121852 702 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm25105-201ENSMUST00000122477 130 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm13194-201ENSMUST00000142299 311 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm23540-201ENSMUST00000157543 164 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm24961-201ENSMUST00000157918 184 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Mir5127-201ENSMUST00000175295 71 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm4854-201ENSMUST00000185902 574 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm8242-202ENSMUST00000193056 475 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm38356-201ENSMUST00000194313 408 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm29704-201ENSMUST00000196011 253 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm44355-201ENSMUST00000200417 104 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm45327-201ENSMUST00000211612 565 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm8231-201ENSMUST00000221617 783 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm25480-201ENSMUST00000083217 133 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm23850-201ENSMUST00000083830 169 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Ccdc43Q9CR29 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm14537-201ENSMUST00000117464 599 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm15783-201ENSMUST00000117521 633 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm5762-201ENSMUST00000119204 258 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm24840-201ENSMUST00000122603 147 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm3370-201ENSMUST00000171785 500 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm24754-201ENSMUST00000177997 107 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm14527-201ENSMUST00000179300 639 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm38268-201ENSMUST00000195813 193 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm43043-201ENSMUST00000196579 412 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm45146-201ENSMUST00000207108 221 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm45530-201ENSMUST00000211658 225 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc43Q9CR29 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Gm12492-201ENSMUST00000117665 564 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Mir7028-201ENSMUST00000185016 64 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Gm37576-201ENSMUST00000194228 372 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Gm18384-201ENSMUST00000195974 808 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Gm9379-201ENSMUST00000196790 646 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc43Q9CR29 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc43Q9CR29 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.83□□□□□ -1.8
Ccdc43Q9CR29 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms